Gene PC1_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1666 
Symbol 
ID8132608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1919355 
End bp1920200 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content57% 
IMG OID644864954 
ProductS-formylglutathione hydrolase 
Protein accessionYP_003017243 
Protein GI253688053 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.37813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCAT CACTGGAACT GCTGGAAGAA CACCGTATGT TTGGCGGCTG GCAACAGCGT 
TACCGCCATG TGTCAGACAC GCTGAACACC ACGATGACGT TCAGCATTTA TCTGCCGCCG
ACGCAGGATG ACACGCCGCC GCCCGTGCTT TACTGGCTGT CCGGGTTAAC CTGCAACGAC
GAAAACTTTA CGACGAAAGC AGGCGCGCAG CGCGTTGCCT CCGAGCTGGG TCTGGTGCTG
GTGATGCCTG ACACCAGCCC GCGTGGCGAC GGCGTAGCAG ATGATGCCGG ATACGATCTG
GGTCAAGGCG CGGGATTCTA CGTGAATGCC ACGCAGGCGC CTTGGTCGGC ACACTACCGG
ATGTATGACT ATATCAGCAG CGAACTGCCA GCGTTGATCC AGCAGCATTT TAACGTGAAC
CGTCGTCAGT CTATCAGTGG GCATTCGATG GGCGGACACG GCGCGCTAAT GCTGGCGCTA
CGCAATCCAG AGCAATTCCT GTCTGCATCC GCGTTTGCGC CGATCGTTAA CCCAAGTCAG
GTTCCCTGGG GACGCAAGGC GCTTACCGCC TATCTCGGCG AGGATGAAAC GCAGTGGCTG
CAGTATGATA GCTGCCATTT ACTGGCAAAT AGCCAGAAGA AGCTGCCAAT GTTAGTCGAT
CAGGGAGACT GCGATCAGTT CCTCCCCGAC CAGTTGCAAC CGGCGAAACT GGAAGCGCTG
GCAAGCCAGT ATGACTGGCC GCTGACGTTG CGGACACAGT CCGGCTATGA CCACAGCTAT
TTCTTCATCG CCAGTTTTAT CGAAGATCAT CTGCGCTTCC ACGCGCACTA TCTGTTTGAA
GAATAA
 
Protein sequence
MTSSLELLEE HRMFGGWQQR YRHVSDTLNT TMTFSIYLPP TQDDTPPPVL YWLSGLTCND 
ENFTTKAGAQ RVASELGLVL VMPDTSPRGD GVADDAGYDL GQGAGFYVNA TQAPWSAHYR
MYDYISSELP ALIQQHFNVN RRQSISGHSM GGHGALMLAL RNPEQFLSAS AFAPIVNPSQ
VPWGRKALTA YLGEDETQWL QYDSCHLLAN SQKKLPMLVD QGDCDQFLPD QLQPAKLEAL
ASQYDWPLTL RTQSGYDHSY FFIASFIEDH LRFHAHYLFE E