| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1396 |
|---|
| Symbol | |
|---|
| ID | 8132335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 1631792 |
|---|
| End bp | 1632895 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644864686 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_003016978 |
|---|
| Protein GI | 253687788 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.498895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCAA TACAAGCGCC ACAAACCTAT CTGAATCGTG ACGGCGTCAT TCGTTCTGTC
GGTGACTATG CGGCTCCCTA CGCCAACACC ATACTGATTA TTACCAGTCC ACTGGCATGG
AAAACGACGG CGGATGCTGT CGAACGCAGC CTCAATGAGC ACGGCTTGCG CTACCAGGTC
GAATTTTTGC CGGGTGATTG CACCAAACCC GCGATCGAGG CGCTGACCGC ACAGGCGCGC
GCCTTCAACG CAGAACTGAT TTTAGGCATT GGCGGCGGGC GTGTGCTGGA TGTCGCCAAA
GCCGTCGGCG ACATTTTGGG ACAGTTGCCC GTCATCGCCG TACCCACCAT TGCCGCTACC
TGCGCCGCCT GGTCACCGAT CAGCGTGATA TACAGCGACA GCGGTGCGCA CAACGGCCCC
TTTCCGCTGA CGCGGTTACC GGTGTGGGTA CTGGTGGACA GCGAGATCAT CGCTCACAGC
CCTTCGCGTT ATCTCAAAGC CGGTATCGTG GATGCGCTGG CGAAGTGGTA TGAATTCCAA
CCTTATTTGC GCCACGGCGA TGACGGGCTG GCATTAGCGC TTAAAGCACA GGCGGCGAAA
CTGGCTGTGG AAACATTTAA TACGTATGGC GAACAGGCCA TCGCAGATAA CGAGCAAGGT
CTGGTCACGC CGACGCTGCG CCGTGTGATC GATGCCGTTA TCGCGCTGGC GGGCGTCGCG
AACAGTATGA AAGATGAGGT GCCACGCATT GGCGTTGCCC ATGCCATTCA CAACAGCATG
ACGCGCCTGC CGGAGCTGCA CGACTGGCTG CATGGTGAGA AAGTCGGTTT TGGTCTGGCT
GCACAGGCCT TTCTGGAACA CGATAACGAT GCTGACCGCG AAGAACTCTT CGCCCAACTG
CGTCGCTACG GCAGCCCGAT AACGCTAAGC GCTCTCGGCC TGAACGAACG CCCACAGCTA
GTCGAAAACA TCGCGCAGCA CGTGAAAATC GCACCGAAAA TTGCCTCACG ACTGCCTTTC
GCCACGGATG CCGAACGAAT CCAACAGGCG CTGTGGCGCA CGCAAACGTT AGAAGCGGGT
GTGATAAATA GCCACGCGGC CTAG
|
|---|
| Protein sequence | MIAIQAPQTY LNRDGVIRSV GDYAAPYANT ILIITSPLAW KTTADAVERS LNEHGLRYQV
EFLPGDCTKP AIEALTAQAR AFNAELILGI GGGRVLDVAK AVGDILGQLP VIAVPTIAAT
CAAWSPISVI YSDSGAHNGP FPLTRLPVWV LVDSEIIAHS PSRYLKAGIV DALAKWYEFQ
PYLRHGDDGL ALALKAQAAK LAVETFNTYG EQAIADNEQG LVTPTLRRVI DAVIALAGVA
NSMKDEVPRI GVAHAIHNSM TRLPELHDWL HGEKVGFGLA AQAFLEHDND ADREELFAQL
RRYGSPITLS ALGLNERPQL VENIAQHVKI APKIASRLPF ATDAERIQQA LWRTQTLEAG
VINSHAA
|
|---|
| |