| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1379 |
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| Symbol | |
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| ID | 8132318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1608019 |
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| End bp | 1608918 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644864669 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003016961 |
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| Protein GI | 253687771 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACA ATATCGAAAC CAAGTGGCTC TATGACTTTA TCATGCTGGA AGAGCACCGG
AGTTTTACGC TGGCGGCGGA GAAGCGGAAT ATCTCTCAAT CCTCATTTAG CCGGCGTATT
CAGGCGCTGG AAGCGGCGGT TGGGTTTGAC ATTTTCGACC GTAGCGCGTT GCCGCTGCAA
TTGACCGAAC AGGGCCGCGT GTTCCACGCC TATATCCGTA ATACGCTGGA CGATCTGGAA
TATCAGCTCA ACAAGCTGCA CGGTGGAGAT AATTACAAAA ATAAGATCAC CATCGCAGCG
GCGCATTCGC TGTCGGTCTT CATCATGCCG GAGCTGTTAA AAGACGTGCC GGATCCGCAG
GAAAAAATCT TCTATGTGGA ATCGATCGAT GTGGATGAAG CGGTACTGAA TCTCAAAGAA
GGGCGCAGCG ACTTCATTTT CTCATTTTAC AATGAGGATC TGATGGGGGA GCCCTTCATG
CACGAGAAGA TACTGGAATC CCGGCTTTAT CCGGTCTGTG CGTGTGATAG TGCAGGGAAG
CCGCTGTTTG ATGTGAGCGC TTCATCGGTA CCGTTACTCA ACTATACCGA GACCAGCTAC
ATGGGGCGTC AGGTTAGCCG TTATTTATCC AGCGTTGATA GCGATAAGTT TACGGTCAAC
TTCGTCTCTT CGATGAGCGA CTTGCTCAAA CGCATGACGA AAAAAGGTTA TGGCATTGCC
TGGCTGCCGG ACTATTCCAT TCAGGAAGAG CTGAAAAATA AAGAGCTGAC GATCCTGAGT
ATGGAAAATG CGGTGATCCG CATGGGCGTT TACCTGTATC GCCTTGATGC ACGACTGAAT
GTGGCTTCTG AGAAGTTCTG GCGTTATATG AAAGGGCTGT CATCGAGCTC TGGACTATAA
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| Protein sequence | MLNNIETKWL YDFIMLEEHR SFTLAAEKRN ISQSSFSRRI QALEAAVGFD IFDRSALPLQ
LTEQGRVFHA YIRNTLDDLE YQLNKLHGGD NYKNKITIAA AHSLSVFIMP ELLKDVPDPQ
EKIFYVESID VDEAVLNLKE GRSDFIFSFY NEDLMGEPFM HEKILESRLY PVCACDSAGK
PLFDVSASSV PLLNYTETSY MGRQVSRYLS SVDSDKFTVN FVSSMSDLLK RMTKKGYGIA
WLPDYSIQEE LKNKELTILS MENAVIRMGV YLYRLDARLN VASEKFWRYM KGLSSSSGL
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