Gene PC1_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1265 
Symbol 
ID8132202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1475243 
End bp1476262 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content52% 
IMG OID644864555 
ProductUDP-galactose-4-epimerase 
Protein accessionYP_003016849 
Protein GI253687659 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTC TCGTCACAGG TGGTAGCGGT TACATAGGAA GTCATACTTG CGTACAATTG 
TTGGCTGCCG GGCACACTCC CGTCATTCTT GATAACTTGT GCAACAGCAA GGCCAGTGTC 
GTTAAAACCA TTACACGTTT AACCGACAAA ACGCCTATTT TTTATCAGGG AGATATCCGC 
GACAGCGCAC TGCTGGACGA CATTTTCGCT AAGCATTCAA TTGATTCCGT CATTCACTTT 
GCCGGTTTAA AAGCTGTGGG AGAATCGGTA CGTGAACCGC TGAGCTATTA TGATAATAAC 
GTCTACGGTA CGCTTGTGCT GGTTGAGGCA ATGAAGAAAG CAGGCGTGAA AAACCTGATT 
TTTAGCTCAT CAGCTACCGT CTATGGCGAT CAGCCGCGCA CGCCCTATCA GGAAAGTTTC 
CCGACGGGGC ACCCTGCCAG CCCCTATGGC CGCAGCAAGC TGATGGTCGA GCAAATCCTG 
CAAGACTTAC AACATGCAGA GCCGGAATGG AGTATTACGC TGTTGCGTTA TTTCAACCCG 
GTTGGCGCAC ATCCATCGGG TGAGATGGGC GAAGATCCGC AGGGTGTGCC CAATAACCTG 
ATGCCTTACA TCGCCCAGGT TGCCGTCGGG CGTCGCGACT CTCTGGCAAT CTTCGGTAAT 
GACTATCCTA CCGTTGACGG CACTGGCGTA CGCGATTACA TCCATGTCGT CGATCTGGCT 
GACGGTCATA TCGCCGCCAT GAACACGCTG CAAAATCGTG CTGGCGTACA CATTTATAAC 
TTGGGTGCTG GCGTAGGCTA CAGTGTATTG CAGGTCGTTG AAGCCTTTAG TCAGGCTTGT 
GGTAAACCCG TCGCTCACCA TTTTTCCCCA CGTCGACAGG GCGATCTGCC TGCTTATTGG 
GCGGATGCAG AACGTGCAGC GAAAGATCTT AACTGGCGAG TCACACGCTC ATTGAAAGAA 
ATGGCGCAAG ACACCTGGCG CTGGCAATCC AACCACCCCA ACGGGTACGA AGAAGCGTAA
 
Protein sequence
MNVLVTGGSG YIGSHTCVQL LAAGHTPVIL DNLCNSKASV VKTITRLTDK TPIFYQGDIR 
DSALLDDIFA KHSIDSVIHF AGLKAVGESV REPLSYYDNN VYGTLVLVEA MKKAGVKNLI 
FSSSATVYGD QPRTPYQESF PTGHPASPYG RSKLMVEQIL QDLQHAEPEW SITLLRYFNP 
VGAHPSGEMG EDPQGVPNNL MPYIAQVAVG RRDSLAIFGN DYPTVDGTGV RDYIHVVDLA 
DGHIAAMNTL QNRAGVHIYN LGAGVGYSVL QVVEAFSQAC GKPVAHHFSP RRQGDLPAYW 
ADAERAAKDL NWRVTRSLKE MAQDTWRWQS NHPNGYEEA