Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_60080 |
Symbol | |
ID | 4384532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5350432 |
End bp | 5352363 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639327444 |
Product | hypothetical protein |
Protein accession | YP_792996 |
Protein GI | 116052680 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000581559 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0000000248833 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAGAC GAATTGATAG CCCAGATACC GACGCCGACC GCGAGATCCA CGCATGCATT GTAGCGACGC CTCCGCAGCC CTTCGTGGTT CGTGCTGGCG CAGGTTCCGG CAAGACCACC TCCCTCATCA AGGCGCTGGA CTGGGTGATC TCGGAGCACG GCGCCAGCAT GCGGGCGAGG AAGCAGAAGG TCGCGTGCAT CACGTATACC GACCTTGCCA CCAATGAAAT CCTGGCGGAC GTCAACGATG ACCCGCTGGT TCATGTCTCG ACCATCCACA GCTTTTACTG GTCTATTGCA AAGACGTTCC AGGCCGACAT CAAGGTTTGG CTGCAGAACG ACATCCGCAG GCGGATCTCC GAACTTGAAG AAGAGTTCGA GAATTACAGC TCGCGTGTCC GGCAGACCAC GCGCGACAGG AACAAGGCCG ACCAAGAGCG ATATGTCCGA AGCCTGGAGG CTGTGGCCGG CGTCAGGACG TTCAACTACG GCGTGGGCAG TGACTACGCC AAGGGCATAC TTGGCCACGA GGACATCCTT CAGCTCGCCG ACTTCCTGCT ACAAAACCGC CCGCTGTTCC GACGGGTCGT GGCGCTGAGC TACCCGTTCG TGTTTATCGA TGAGAGTCAG GACACGTTCC CGGGTGTAGT GAAGTCTTTC AAGGAAGTGG AAGCCCAGAT GCAGGGCAAG TTCTGCCTTG GTTTTTTCGG CGACCCGATG CAGTCGATCT TCATGAGAGG CGCAGGGGAC ATCCAGCTTG AGGATCATTG GCGGGCCATC ACGAAGCCGG AGAACTTTCG CTGCGCCAAG CAGATCCTTG ACGTCGCCAA TGCCGTGCGC GCGCAGGGCG ATGGCATGGA GCAAGTCCGC GGGCTGCACG AGAGGGTCGA TGGGAACCTC AAGCTGGTGG AGGGGTCGGC CCGGATGTTC GTCTTGCCGA ACACGCTGAA CCGAACCGAG GCTTTGGCAA GAGTCCGAGC GTGGAGCTCG GCGACGAACA ACGACGAGGG TTGGACAACC CCAGACATCG CAGTCAAGAT TCTTGTCATC GTGCACCGCA TGGCCGCAAA CCGGCTTGGC TTCGGCGGCA TCTACTCGGC GCTGAACGAC AAGACGTCGG ATGCCATGAA GCAAGGGATG CAGGACGGCA CCGGTTGGCC CGTTCGACCC TTCCTAAGTT TTGCGCTACC GATCGTTGCA GCTGTGAAGG CCGGCAATGA GTTCGCGGCG ATGAGCCTGC TCCGGGAATT CAGCCCGCGC CTGGCGCCTG CGGCTCTGAC CGGCCGACGT GCCGCGGATG TATTGCGAGA GCTGCACGCT GCTGCGTCGA GGCTTGTCGC CATGCTGGAC GAGGCAGGGA CCACCATTGG TGACATAGCT CTCCATCTCT GTGACACGGG TCTTTTTGAG TTCGACGAGC GCTATGCGCG TGTTCTTGGG TTTGTCAGGG ATATTGCTGA CACCGCTCAG GAGCCCGAGG CTGCTGATGC AGTTCCGGCC GAAGGATTAT CCTTGGACGC GACAATGGCC AAGTTCTTCA ATTGCTCTGC GCAAGAGCTT TGGCCCTATG AACGCTATGT CTCAGAAGGC TCCCCCTATG CCACGCAGCA CGGCGTGAAG GGAGCGCAGT TCGAACGCGT CATGGTGGTG ATGGACGAGG AAGAAAGCGA CTACCGAACG TACAACTACG AGCGTGTCTT CGCGAGTGCT GAGGCCCGCG CTGCAGATCG TGCACGAGCA CTAGACGGTG ATGAAAACAC TTGGAGCCGA ACGCTGCGAC TGCTTTACGT CTGCTGCACT CGTGCCCAGC GGGGGCTGGT ACTAGCGTTC TTTGTCGCCG ACCCTGCGAC CACCCTGGAA AACGTCGTGG CGAGCGGGAT CTTGCCGCGA AGCGCAGTCT TTACGCAGGA AGTGTTAGTT GGATGGCCAT AG
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Protein sequence | MSRRIDSPDT DADREIHACI VATPPQPFVV RAGAGSGKTT SLIKALDWVI SEHGASMRAR KQKVACITYT DLATNEILAD VNDDPLVHVS TIHSFYWSIA KTFQADIKVW LQNDIRRRIS ELEEEFENYS SRVRQTTRDR NKADQERYVR SLEAVAGVRT FNYGVGSDYA KGILGHEDIL QLADFLLQNR PLFRRVVALS YPFVFIDESQ DTFPGVVKSF KEVEAQMQGK FCLGFFGDPM QSIFMRGAGD IQLEDHWRAI TKPENFRCAK QILDVANAVR AQGDGMEQVR GLHERVDGNL KLVEGSARMF VLPNTLNRTE ALARVRAWSS ATNNDEGWTT PDIAVKILVI VHRMAANRLG FGGIYSALND KTSDAMKQGM QDGTGWPVRP FLSFALPIVA AVKAGNEFAA MSLLREFSPR LAPAALTGRR AADVLRELHA AASRLVAMLD EAGTTIGDIA LHLCDTGLFE FDERYARVLG FVRDIADTAQ EPEAADAVPA EGLSLDATMA KFFNCSAQEL WPYERYVSEG SPYATQHGVK GAQFERVMVV MDEEESDYRT YNYERVFASA EARAADRARA LDGDENTWSR TLRLLYVCCT RAQRGLVLAF FVADPATTLE NVVASGILPR SAVFTQEVLV GWP
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