Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_35860 |
Symbol | |
ID | 4381398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3190988 |
End bp | 3192292 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639325449 |
Product | amino acid permease |
Protein accession | YP_791018 |
Protein GI | 116050165 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000332281 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 9.326859999999999e-20 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGAAGCGCA CGCTGGGTCC GTTTTCCGTT CTGCTGTTCG GTCTGGCGTT CCTCGCTCCG TTGATCGTGT TCGGCACCTA TGGCGTGATC ACGCAGGCCA GCGGCAACAC CACGGCGATG GCCTACCTGA TCGCGGCAAT CGGCGTGGTG TTCACGGCCT TGAGCTATGG CCGGCTGGTC AGGGTGTTCC CGGTCGCCGG TTCGGCCTAC ACCTATACCC GCAAGATGCT GAGCGCGAAC CTCGGCTTCA TGGTGGGCTG GGCCGCCCTG CTCGATTACT TCTTCATCCC GATGCTGATC TGGCTGCTCG GCGCCAGCTA CCTCAACATG GCCTTTCCAG AGGTGCCGCA ATGGGTGTGG ATCATCGGCT TCATCGTCTC CACCTCGCTG CTTAATATCC TGGGCATCCA GGTCGCCAAC CGCTTCAACG TGCTGTTGAT GGTCGCGCAA CTGGCCATCA TCGTCGTGTT CATCAGCCTG TGCGTGCACT ACATCGTCGC GGCCAACGGC CCTGGCGGGC TGCTGTCGGC CAAGCCGTTC TTCAACCCGG ACGTGTCCTT CGCCACCAGC ATGGCCGGCG CCGCCATTGC CGCGTACTCG TTCCTGGGCT TCGACGCGCT GTCCACGCTC AGCGAGGAGA CCCGCGACCC GGGCCGGACA CTGCCGCGCG CGATCCTGCT GGTCGCATTG ATCGGCGGCT CGGTCTACGT CGGCTCGTCG TACTTCATGT ACCTGGCGCA TCCCTCCCCC GCCTTCGAGC ATGTGGACGG CGCCGCCTTC GAGATCGCCC GCATGATCGG CGGCGACCTG TTCTTCGCCG TGGTCCTGGC GGGGATCATC ATCGCCCACT TCGCCGCAGG CATGTCGTTC CAGGCCAGCG TGGGCCGGCT GCTGTACGCC CTGGGGCGGG ACAACCAACT GCCGCGCAAG CTGTTCGGTG CCCTGCATCC TCGCTACAAG ACCCCGGCCT TCAACATTCT GCTCTGCGGC ATTTTCGGCT GCGCGGGTTT TGCCCTGACG ATCGCCACCG CGACGTCCCT GGTCAATTTC GGCGCGTTTC TCGCCTTCAG CGCAGTCAAC CTTTGCGCGT TGCGGCTCTC CTTCGATACC CGCCTCGGAG ACGGGGCGGG CTTGCTGCAC GGGGTGCTCT GCCCGCTCGT TGGCCTGGTC ACGGCCGGGT GGATGCTGGT CAGCCTGGAT AACGACGCGC TGATCATGGG CTGTAGCTGG CTGGGCCTGG GGGCGGTCTA TCTCGCTTGC CGGACCAGCT TCTTCCGCAA CCCGGTGCCC GACGCGCTGG CGTAG
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Protein sequence | MKRTLGPFSV LLFGLAFLAP LIVFGTYGVI TQASGNTTAM AYLIAAIGVV FTALSYGRLV RVFPVAGSAY TYTRKMLSAN LGFMVGWAAL LDYFFIPMLI WLLGASYLNM AFPEVPQWVW IIGFIVSTSL LNILGIQVAN RFNVLLMVAQ LAIIVVFISL CVHYIVAANG PGGLLSAKPF FNPDVSFATS MAGAAIAAYS FLGFDALSTL SEETRDPGRT LPRAILLVAL IGGSVYVGSS YFMYLAHPSP AFEHVDGAAF EIARMIGGDL FFAVVLAGII IAHFAAGMSF QASVGRLLYA LGRDNQLPRK LFGALHPRYK TPAFNILLCG IFGCAGFALT IATATSLVNF GAFLAFSAVN LCALRLSFDT RLGDGAGLLH GVLCPLVGLV TAGWMLVSLD NDALIMGCSW LGLGAVYLAC RTSFFRNPVP DALA
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