Gene PA14_34780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_34780 
Symbol 
ID4384353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3088331 
End bp3089179 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content70% 
IMG OID639325362 
Productputative ABC transporter ATP-binding component 
Protein accessionYP_790931 
Protein GI116050252 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0748092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0155255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG CCTCCCGCCA ACCTTCCACG CTCCCCGCCG ACGCCCTGCT GGCGGTGGAC 
GGAGTCAGCC TCGAATACCG CACCCGCTCG CGCGTGGTGC GGGCCACCCA GCGGGTCAGC
TTCGAAGTCG ACCCGGCCGA TCGCTTCGTC CTGCTCGGCC CGTCCGGCTG CGGCAAGTCG
ACCCTGCTCA AGGCGGTGGC TGGCTTCATC ACGCCCAGCG AGGGCGAGAT CCGCCTTCAG
GGACAGGCGG TCAGGGCGCC CGGCCCCGAC CGTATCGTGG TGTTCCAGGA GTTCGACCAG
TTGCCGCCAT GGAAGACCGT ACGGCAGAAC GTGCTGTTTC CCTTGCGGGT GTCCGGCCAG
GTGGCGCGCG ACGAGGCCGA GCGACGCGCC GACGAATGCC TCGAGAAGGT CGGCCTGGCG
GGCTTCGCCG AGGCCTACCC GCACACGCTG TCCGGGGGCA TGAAGGCGCG GGTGGCGATC
GCCCGGGCGC TGGCGATGCA GCCGAAGATC CTGCTGATGG ACGAGCCGTT CGCCGCGCTG
GACGCGCTGA CCCGGCGAAA GATGCAGGAA GAGCTGCTGC GCCTGTGGGA AGAGGTGCGT
TTCACCCTGC TGTTCGTCAC CCATTCCATC GAGGAGGCGT TGGTGGTGGG CAACCGCATC
CTGCTGCTCT CGCCGCACCC GGGGCGGGTC CGGGCCGAAG TGCACGGCCA CCCGTTCGGG
CTGCACAGCC TGGGTGGCGA AGCGCTGCAA GCCGCGGCGC GACGCATCCA CCGCTTGCTG
TTCGACGAGG GCGGCGAACC GACGGCGGCC GCGACCCTCG ACTTCGCCGA CATCCGTCTG
GCCCACTGA
 
Protein sequence
MNAASRQPST LPADALLAVD GVSLEYRTRS RVVRATQRVS FEVDPADRFV LLGPSGCGKS 
TLLKAVAGFI TPSEGEIRLQ GQAVRAPGPD RIVVFQEFDQ LPPWKTVRQN VLFPLRVSGQ
VARDEAERRA DECLEKVGLA GFAEAYPHTL SGGMKARVAI ARALAMQPKI LLMDEPFAAL
DALTRRKMQE ELLRLWEEVR FTLLFVTHSI EEALVVGNRI LLLSPHPGRV RAEVHGHPFG
LHSLGGEALQ AAARRIHRLL FDEGGEPTAA ATLDFADIRL AH