Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_34450 |
Symbol | |
ID | 4380397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3063779 |
End bp | 3064684 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325338 |
Product | AraC family transcriptional regulator |
Protein accession | YP_790907 |
Protein GI | 116050276 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000000710752 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.295536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCGT CCAACCCGCT TGTCGATTGG TTATTAGACA GCCTCGAAGT CGACACCAGC CTGTTCCATG TCGGTCGCTA CTGCGGCGGC TGGCATGCCT CCACCCACGG CCTGGCGCGT GCCAGCTTCC ACCTGGTGGT GCAGGGACAC TGCTGGGCGC ACGTCGCCGG AAGCGCCCGG GGCTGGCGAC TGGACAGCGG CGACGCGCTG TTCTTCCTGC GCGACGTCGA GTTCCGCCTG TCCAGCGAGG CCACCGCCGA GGCCGCGCGC TGCCAGCCGC GCGGCGAAAT GCAGGCGCTG GAGTGGAACG CGGCGGACGG TGCCGGCCTG GTCTGCGGGT TCTTCCACTT CCATTCGGGA TTGTCCGGGC TGATCGTCGA CGCCCTGCCC GACTGGCTGA TCCTGCGCGC CGGCGATCCG GCGCTGGACG CGGCGCGACG CCTGTTCGCC CTGATCGTCG ACGAGTGCCG CCGCCAGCCG GCGCCGTCGC CGGTTCTGCT GGAGCGCCTC AGCCACCTGC TGTTCCTCTA CGTGTTGCGC CAGCAGGTGC TCGACAACCC GACCCTCGGC GGCCTGGTGG CACTGGCCCG CCAGCCGCAG TTCGCCGGCC TGCTGGAAGC GCTGATCGAG GCACCCGAAC AGCCCTGGAG CCTGGAACAG ATGGCCGAAC GCACCGGACT CTCGCGCTCG GCCTTCTTCA AGCGCTTCAA CGAACTCAGC GGTCAGTCGC CGGGACAGGT CCTGCTGGCC CTGCGCATGC ACCGCGCCTG CGCCCTGCTG CGCGCCGACG CCAGCGTCGC CGAGGTCGCG GCGGCGGTCG GCTACCAGTC CACCGCCGCC TTCACCCGTG CCTTCCACAA GGCCACCGGG CAGCAGCCGG GGGCCTATCG CAAGGCCAGC CGCTGA
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Protein sequence | MNSSNPLVDW LLDSLEVDTS LFHVGRYCGG WHASTHGLAR ASFHLVVQGH CWAHVAGSAR GWRLDSGDAL FFLRDVEFRL SSEATAEAAR CQPRGEMQAL EWNAADGAGL VCGFFHFHSG LSGLIVDALP DWLILRAGDP ALDAARRLFA LIVDECRRQP APSPVLLERL SHLLFLYVLR QQVLDNPTLG GLVALARQPQ FAGLLEALIE APEQPWSLEQ MAERTGLSRS AFFKRFNELS GQSPGQVLLA LRMHRACALL RADASVAEVA AAVGYQSTAA FTRAFHKATG QQPGAYRKAS R
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