Gene PA14_33420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_33420 
Symbol 
ID4380480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2940949 
End bp2941629 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content65% 
IMG OID639325255 
Productputative hydrolase 
Protein accessionYP_790824 
Protein GI116050359 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.174532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0254919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTC CCGCCAACTT CAACGGCCAG ACCCCGAAGA TCGATCCGGC CAACGCCGCC 
ATGTTGCTGA TCGACCACCA GAGCGGCCTG TTCCAGACGG TCAAGGACAT GCCGATGACC
GAACTGCGCG CCAACGCCAC CACCCTGGCC AAGGTCGCCA CCCTGGCGAA GATCCCGGTG
ATCACCACCG CCTCGGTACC GCAGGGCCCC AACGGCCCGC TGATCCCGGA GATCCACGAG
GCCGCGCCGC ACGCCCAGTA CGTCGCGCGC AAGGGTGAGA TCAATGCCTG GGACAACCCG
GAATTCGTCG CCGCGGTGAA GGCCACCGGC AAGAAGCAAC TGATCATCGC CGGCACCATC
ACCAGCGTGT GCATGGCCTT CCCCAGCATC GCCGCGGTAC ACGACGGCTA TCAGGTGTTC
GCGGTGATCG ACGCCTCCGG CACCTACTCC AAGATGGCCC AGGAAGTCAC CCTGGCACGG
GTGGTCCAGG CCGGCGTGGT GCCGATGGAC ACCGCCGCGG TCTGCTCGGA AATCCAGCGC
ACCTGGAACC GCGACGACGC TGTGCAGTTC GCCGAAGCCT ACAGCGCGGT ATTCCCGCAC
TACCAACTGC TGATCGAGAG CTACGCCAAG GCCCAGGCCG TGGTCAACAA CCACGAGCAA
CTGGATTCGC AGCGCAAGTG A
 
Protein sequence
MSAPANFNGQ TPKIDPANAA MLLIDHQSGL FQTVKDMPMT ELRANATTLA KVATLAKIPV 
ITTASVPQGP NGPLIPEIHE AAPHAQYVAR KGEINAWDNP EFVAAVKATG KKQLIIAGTI
TSVCMAFPSI AAVHDGYQVF AVIDASGTYS KMAQEVTLAR VVQAGVVPMD TAAVCSEIQR
TWNRDDAVQF AEAYSAVFPH YQLLIESYAK AQAVVNNHEQ LDSQRK