Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_33420 |
Symbol | |
ID | 4380480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2940949 |
End bp | 2941629 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639325255 |
Product | putative hydrolase |
Protein accession | YP_790824 |
Protein GI | 116050359 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.174532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0254919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTC CCGCCAACTT CAACGGCCAG ACCCCGAAGA TCGATCCGGC CAACGCCGCC ATGTTGCTGA TCGACCACCA GAGCGGCCTG TTCCAGACGG TCAAGGACAT GCCGATGACC GAACTGCGCG CCAACGCCAC CACCCTGGCC AAGGTCGCCA CCCTGGCGAA GATCCCGGTG ATCACCACCG CCTCGGTACC GCAGGGCCCC AACGGCCCGC TGATCCCGGA GATCCACGAG GCCGCGCCGC ACGCCCAGTA CGTCGCGCGC AAGGGTGAGA TCAATGCCTG GGACAACCCG GAATTCGTCG CCGCGGTGAA GGCCACCGGC AAGAAGCAAC TGATCATCGC CGGCACCATC ACCAGCGTGT GCATGGCCTT CCCCAGCATC GCCGCGGTAC ACGACGGCTA TCAGGTGTTC GCGGTGATCG ACGCCTCCGG CACCTACTCC AAGATGGCCC AGGAAGTCAC CCTGGCACGG GTGGTCCAGG CCGGCGTGGT GCCGATGGAC ACCGCCGCGG TCTGCTCGGA AATCCAGCGC ACCTGGAACC GCGACGACGC TGTGCAGTTC GCCGAAGCCT ACAGCGCGGT ATTCCCGCAC TACCAACTGC TGATCGAGAG CTACGCCAAG GCCCAGGCCG TGGTCAACAA CCACGAGCAA CTGGATTCGC AGCGCAAGTG A
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Protein sequence | MSAPANFNGQ TPKIDPANAA MLLIDHQSGL FQTVKDMPMT ELRANATTLA KVATLAKIPV ITTASVPQGP NGPLIPEIHE AAPHAQYVAR KGEINAWDNP EFVAAVKATG KKQLIIAGTI TSVCMAFPSI AAVHDGYQVF AVIDASGTYS KMAQEVTLAR VVQAGVVPMD TAAVCSEIQR TWNRDDAVQF AEAYSAVFPH YQLLIESYAK AQAVVNNHEQ LDSQRK
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