Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_31680 |
Symbol | |
ID | 4381447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2751825 |
End bp | 2753564 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639325125 |
Product | hypothetical protein |
Protein accession | YP_790694 |
Protein GI | 116050487 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.373296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.574321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTGA CTCAAGGATT GTTCCGGTTC CCGCTGGCCG GGCTGCTGTG CCTGAGTACG GCCGCCTTCG CGGAGAGCCA GCTTAGCGTG CGCGTCACCC CCGCCAATGC CGCCCTGAAG GCCAATATCG AGGCCTATGT GGGTAGCCTC GGCGAGCGGG ACGAAGCGGC GTTGCAACGT TTCCGCCGCA ATGCCGAAGC GCAGGCGGAA AAGGCGGCCC AGGCGCTCGG CTACTTCCAG GCGCAGATCG ACAGCGAGGT GAAGGACGGC AAGCCGCCGA AGCTCACGCT CAAGGTAGTG CCCGGCGAGC CCGTGCGCCT GCGCCAGGTG AATATCCAGG TGCTCGGCGA GGCCGCCAGC CTGGAGAGCT TCCGCTTGCC GTCGGGCAAG CAACTGAAAC CGGGCGCGAA GCTGAACCAG GGCGTCTACG AGGACGCCAA GCGGCTGATC CAGAACCAGG CCTCGCGCTA CGGCTTCTTC CAGGGCCGCT TCAGCACCCA GCGCCTGAGC ATCGATCCGC GCGCCGGCAT CGCCGACATC GACCTGGTCT ACGACAGCGG CCAGCGCTAC ACCTTCGGCA AGGTGAGCTT CGACGGCGAC TCGATCATCG AGGAAGAACT GTTGCGCCGC ATGGTGCCGT TCAAGGCCGG CCAACCCTAT GACTCCGAAC TGATCGCCGA ACTCAACCAG AACCTGCAAT CCAGCGGCTA CTTCGAGGGC GTGCGGGTCG ACGCCGCGCC GACCCAGGCG CAGGCCGACG GCGCGCGCCA GGCGATCCCG GTAGCGGTCC GGCTGGAGGC GCGCAAGCCC CGGACCATGG GCGTCGGCCT CGGCTTCTCG ACCGACGTCG GGGCGCGCGC GAGGTTCAAC TGGACCCGCC ATTGGGTGAA TGCCGAAGGG CATAGCCTGG GATTCGAGTC GGAAATCTCC GCACCACGGC AGAACGTCGG CGCCTGGTAC GAGATTCCCC TCGATCCGCC GCTCACCGAC AAGCTGCGCT TCACCAGCGG CTACCAGTTC GAAGACCTGG TCGACACCGA GAGCAAGCTG CTGACCCTTG GCGGCGAATG GCACAGCAAG CAGCCCGGTG GCTGGCAGCG GGTGGTTTCG CTGAACTGGA TGCGCGAGGA GTACAAGCTG GGCGACGACT CCGGGCTGAG CAGCTTCCTG ATGCCGGGGA TCGGCTACTC GCTGCTGGAG ACCGACAACA AGGTCGACCC CAGCCATGGC TACCGCCTGC AGTTCAACGT CAAGGGGGCG AAGGAAGGCC TGCTGGCCGA CGCCGACGTC CTCCATGTCG ACGCCATGGC CAAGGGCCTG ACCAGCTTCG CCGGCGGCCA TCGCCTGCTC GGCCGCCTGC AGGTAGGCGG AATCGCCACC AACGACTACA AGTCGATCCC GCCCTCGCTG CGCTTCTTCG CCGGCGGCGA CCAGAGCGTG CGTGGCTACG ACTACCGGAC GCTGTCGCCG GAGAATTCCG ATGGCGACAA GATCGGCGGC CGCTACATGA TCGCCGGCAG CGTCGAGTAT CAATATCCGC TGGCCGAGCG CTGGCGCCTG GCGACCTTCG TCGACCAGGG CAACGCCTTC AACTCGCTGG ACTTCCCGTC GATCAAGACC GGGGTCGGCT TCGGCGTGCG CTGGGTCTCG CCGGTCGGCC CGTTGCGCCT CGACCTGGCC CATGCGCTCG ACGACGATGG CGGTTTCCGC CTGCACTTCT CCATGGGGCC AGAACTGTGA
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Protein sequence | MRLTQGLFRF PLAGLLCLST AAFAESQLSV RVTPANAALK ANIEAYVGSL GERDEAALQR FRRNAEAQAE KAAQALGYFQ AQIDSEVKDG KPPKLTLKVV PGEPVRLRQV NIQVLGEAAS LESFRLPSGK QLKPGAKLNQ GVYEDAKRLI QNQASRYGFF QGRFSTQRLS IDPRAGIADI DLVYDSGQRY TFGKVSFDGD SIIEEELLRR MVPFKAGQPY DSELIAELNQ NLQSSGYFEG VRVDAAPTQA QADGARQAIP VAVRLEARKP RTMGVGLGFS TDVGARARFN WTRHWVNAEG HSLGFESEIS APRQNVGAWY EIPLDPPLTD KLRFTSGYQF EDLVDTESKL LTLGGEWHSK QPGGWQRVVS LNWMREEYKL GDDSGLSSFL MPGIGYSLLE TDNKVDPSHG YRLQFNVKGA KEGLLADADV LHVDAMAKGL TSFAGGHRLL GRLQVGGIAT NDYKSIPPSL RFFAGGDQSV RGYDYRTLSP ENSDGDKIGG RYMIAGSVEY QYPLAERWRL ATFVDQGNAF NSLDFPSIKT GVGFGVRWVS PVGPLRLDLA HALDDDGGFR LHFSMGPEL
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