Gene PA14_31680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_31680 
Symbol 
ID4381447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2751825 
End bp2753564 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content67% 
IMG OID639325125 
Producthypothetical protein 
Protein accessionYP_790694 
Protein GI116050487 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0729] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.373296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.574321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGA CTCAAGGATT GTTCCGGTTC CCGCTGGCCG GGCTGCTGTG CCTGAGTACG 
GCCGCCTTCG CGGAGAGCCA GCTTAGCGTG CGCGTCACCC CCGCCAATGC CGCCCTGAAG
GCCAATATCG AGGCCTATGT GGGTAGCCTC GGCGAGCGGG ACGAAGCGGC GTTGCAACGT
TTCCGCCGCA ATGCCGAAGC GCAGGCGGAA AAGGCGGCCC AGGCGCTCGG CTACTTCCAG
GCGCAGATCG ACAGCGAGGT GAAGGACGGC AAGCCGCCGA AGCTCACGCT CAAGGTAGTG
CCCGGCGAGC CCGTGCGCCT GCGCCAGGTG AATATCCAGG TGCTCGGCGA GGCCGCCAGC
CTGGAGAGCT TCCGCTTGCC GTCGGGCAAG CAACTGAAAC CGGGCGCGAA GCTGAACCAG
GGCGTCTACG AGGACGCCAA GCGGCTGATC CAGAACCAGG CCTCGCGCTA CGGCTTCTTC
CAGGGCCGCT TCAGCACCCA GCGCCTGAGC ATCGATCCGC GCGCCGGCAT CGCCGACATC
GACCTGGTCT ACGACAGCGG CCAGCGCTAC ACCTTCGGCA AGGTGAGCTT CGACGGCGAC
TCGATCATCG AGGAAGAACT GTTGCGCCGC ATGGTGCCGT TCAAGGCCGG CCAACCCTAT
GACTCCGAAC TGATCGCCGA ACTCAACCAG AACCTGCAAT CCAGCGGCTA CTTCGAGGGC
GTGCGGGTCG ACGCCGCGCC GACCCAGGCG CAGGCCGACG GCGCGCGCCA GGCGATCCCG
GTAGCGGTCC GGCTGGAGGC GCGCAAGCCC CGGACCATGG GCGTCGGCCT CGGCTTCTCG
ACCGACGTCG GGGCGCGCGC GAGGTTCAAC TGGACCCGCC ATTGGGTGAA TGCCGAAGGG
CATAGCCTGG GATTCGAGTC GGAAATCTCC GCACCACGGC AGAACGTCGG CGCCTGGTAC
GAGATTCCCC TCGATCCGCC GCTCACCGAC AAGCTGCGCT TCACCAGCGG CTACCAGTTC
GAAGACCTGG TCGACACCGA GAGCAAGCTG CTGACCCTTG GCGGCGAATG GCACAGCAAG
CAGCCCGGTG GCTGGCAGCG GGTGGTTTCG CTGAACTGGA TGCGCGAGGA GTACAAGCTG
GGCGACGACT CCGGGCTGAG CAGCTTCCTG ATGCCGGGGA TCGGCTACTC GCTGCTGGAG
ACCGACAACA AGGTCGACCC CAGCCATGGC TACCGCCTGC AGTTCAACGT CAAGGGGGCG
AAGGAAGGCC TGCTGGCCGA CGCCGACGTC CTCCATGTCG ACGCCATGGC CAAGGGCCTG
ACCAGCTTCG CCGGCGGCCA TCGCCTGCTC GGCCGCCTGC AGGTAGGCGG AATCGCCACC
AACGACTACA AGTCGATCCC GCCCTCGCTG CGCTTCTTCG CCGGCGGCGA CCAGAGCGTG
CGTGGCTACG ACTACCGGAC GCTGTCGCCG GAGAATTCCG ATGGCGACAA GATCGGCGGC
CGCTACATGA TCGCCGGCAG CGTCGAGTAT CAATATCCGC TGGCCGAGCG CTGGCGCCTG
GCGACCTTCG TCGACCAGGG CAACGCCTTC AACTCGCTGG ACTTCCCGTC GATCAAGACC
GGGGTCGGCT TCGGCGTGCG CTGGGTCTCG CCGGTCGGCC CGTTGCGCCT CGACCTGGCC
CATGCGCTCG ACGACGATGG CGGTTTCCGC CTGCACTTCT CCATGGGGCC AGAACTGTGA
 
Protein sequence
MRLTQGLFRF PLAGLLCLST AAFAESQLSV RVTPANAALK ANIEAYVGSL GERDEAALQR 
FRRNAEAQAE KAAQALGYFQ AQIDSEVKDG KPPKLTLKVV PGEPVRLRQV NIQVLGEAAS
LESFRLPSGK QLKPGAKLNQ GVYEDAKRLI QNQASRYGFF QGRFSTQRLS IDPRAGIADI
DLVYDSGQRY TFGKVSFDGD SIIEEELLRR MVPFKAGQPY DSELIAELNQ NLQSSGYFEG
VRVDAAPTQA QADGARQAIP VAVRLEARKP RTMGVGLGFS TDVGARARFN WTRHWVNAEG
HSLGFESEIS APRQNVGAWY EIPLDPPLTD KLRFTSGYQF EDLVDTESKL LTLGGEWHSK
QPGGWQRVVS LNWMREEYKL GDDSGLSSFL MPGIGYSLLE TDNKVDPSHG YRLQFNVKGA
KEGLLADADV LHVDAMAKGL TSFAGGHRLL GRLQVGGIAT NDYKSIPPSL RFFAGGDQSV
RGYDYRTLSP ENSDGDKIGG RYMIAGSVEY QYPLAERWRL ATFVDQGNAF NSLDFPSIKT
GVGFGVRWVS PVGPLRLDLA HALDDDGGFR LHFSMGPEL