| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23470 |
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| Symbol | wbpM |
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| ID | 4381141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2041610 |
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| End bp | 2043607 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639324447 |
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| Product | nucleotide sugar epimerase/dehydratase WbpM |
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| Protein accession | YP_790032 |
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| Protein GI | 116051137 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000136897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.00347476 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGATA AAGTGCGTAT GAGGCTCCTC GGGATGCCTC GCAGGTACAA GAGGATGCTG
CAGATCATCG CAGATGTGAT TTTGGTATGG CTATCGCTCT GGCTAGCCTT CCTGGTCAGG
CTGGGCACGG AAGACATGAT CAGCCCCTTC GAGGGCCATG CCTGGCTGTT CATCGCCGCC
CCGTTGGTGG CCATTCCCCT GTTCATCCGC TTCGGCATGT ACCGGGCGGT GATGCGCTAC
CTAGGCAACG ACGCCCTTAT CGCGATCGCC AAGGCCGTCA CCATTTCCGC GCTGGTCCTG
TCGTTGCTGG TCTATTGGTA CCGCTCCCCG CCGGCGGTGG TGCCGCGTTC CCTGGTGTTC
AACTACTGGT GGTTGAGCAT GCTGCTGATC GGCGGCTTGC GTCTGGCTAT GCGCCAGTAT
TTCATGGGCG ACTGGTACTC TGCTGTGCAG TCGGTACCAT TTCTCAATCG CCAGGACGGC
CTGCCCAGGG TGGTCATCTA TGGCGCTGGC GCGGCCGGCA ACCAGTTGGT TGCGGCATTG
CGTCTCGGTC GGGCGATGCG TCCGGTGGCG TTCATCGATG ATGACAAGCA GATCGCCAAC
CGGGTCATCG CCGGTCTGCG GGTCTATACC GCCAAGCATA TCCGCCAGAT GATCGACGAG
ACGGGCGCGC AGGAGGTTCT CCTGGCGATT CCTTCCGCCA CTCGGGCCCG GCGCCGAGAG
ATTCTCGAGT CCCTGGAGCC GTTCCCGCTG CACGTGCGCA GCATGCCCGG CTTCATGGAC
CTGGCCAGCG GCCGGGTCAA GGTGGATGAC CTGCAGGAGG TGGACATCGC TGACCTGCTG
GGGCGCGACA GCGTCGCACC GCGCAAGGAG CTGCTGGAAC GGTGCATCCG CGGTCAGGTG
GTGATGGTGA CCGGGGCGGG CGGCTCTATC GGTTCGGAAC TCTGTCGGCA GATCATGAGT
TGTTCGCCTA GCGTGCTGAT CCTGTTCGAA CACAGCGAAT ACAACCTCTA TAGCATCCAT
CAGGAACTGG AGCGTCGGAT CAAGCGCGAG TCGCTTTCGG TGAACCTGTT GCCGATCCTC
GGTTCGGTGC GCAATCCCGA GCGCCTGGTG GACGTGATGC GTACCTGGAA GGTCAATACC
GTCTACCATG CGGCGGCCTA CAAGCATGTG CCGATCGTCG AGCACAACAT CGCCGAGGGC
GTTCTCAACA ACGTGATAGG CACCTTGCAT GCGGTGCAGG CCGCGGTGCA GGTCGGCGTG
CAGAACTTCG TGCTGATTTC CACCGACAAG GCGGTGCGAC CGACCAATGT GATGGGCAGC
ACCAAGCGCC TGGCGGAGAT GGTCCTTCAG GCGCTCAGCA ACGAATCGGC GCCGGTGCTG
TTCGGCGACC GGAAGGACGT GCATCACGTC AACAAGACCC GTTTCACCAT GGTCCGCTTC
GGCAACGTCC TCGGTTCGTC CGGTTCGGTC ATTCCGCTGT TCCGCGAGCA GATCAAGCGC
GGCGGCCCGG TGACGGTCAC CCACCCGAGC ATCACCCGTT ACTTCATGAC CATTCCCGAG
GCGGCGCAGT TGGTCATCCA GGCCGGTTCG ATGGGGCAGG GCGGAGATGT ATTCGTGCTG
GACATGGGGC CGCCGGTGAA GATCCTGGAG CTCGCCGAGA AGATGATCCA CCTGTCCGGC
CTGAGCGTGC GTTCCGAGCG TTCGCCCCAT GGTGACATCG CCATCGAGTT CAGTGGCCTG
CGTCCTGGCG AGAAGCTCTA CGAAGAGCTG CTGATCGGTG ACAACGTGAA TCCCACCGAC
CATCCGATGA TCATGCGGGC CAACGAGGAA CACCTGAGCT GGGAGGCCTT CAAGGTCGTG
CTGGAGCAGT TGCTGGCCGC CGTGGAGAAG GACGACTACT CGCGGGTTCG CCAGTTGCTG
CGGGAAACCG TCAGCGGCTA TGCGCCTGAC GGTGAAATCG TCGACTGGAT CTATCGCCAG
AGGCGGCGAG AACCCTGA
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| Protein sequence | MFDKVRMRLL GMPRRYKRML QIIADVILVW LSLWLAFLVR LGTEDMISPF EGHAWLFIAA
PLVAIPLFIR FGMYRAVMRY LGNDALIAIA KAVTISALVL SLLVYWYRSP PAVVPRSLVF
NYWWLSMLLI GGLRLAMRQY FMGDWYSAVQ SVPFLNRQDG LPRVVIYGAG AAGNQLVAAL
RLGRAMRPVA FIDDDKQIAN RVIAGLRVYT AKHIRQMIDE TGAQEVLLAI PSATRARRRE
ILESLEPFPL HVRSMPGFMD LASGRVKVDD LQEVDIADLL GRDSVAPRKE LLERCIRGQV
VMVTGAGGSI GSELCRQIMS CSPSVLILFE HSEYNLYSIH QELERRIKRE SLSVNLLPIL
GSVRNPERLV DVMRTWKVNT VYHAAAYKHV PIVEHNIAEG VLNNVIGTLH AVQAAVQVGV
QNFVLISTDK AVRPTNVMGS TKRLAEMVLQ ALSNESAPVL FGDRKDVHHV NKTRFTMVRF
GNVLGSSGSV IPLFREQIKR GGPVTVTHPS ITRYFMTIPE AAQLVIQAGS MGQGGDVFVL
DMGPPVKILE LAEKMIHLSG LSVRSERSPH GDIAIEFSGL RPGEKLYEEL LIGDNVNPTD
HPMIMRANEE HLSWEAFKVV LEQLLAAVEK DDYSRVRQLL RETVSGYAPD GEIVDWIYRQ
RRREP
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