16 homologs were found in PanDaTox collection
for query gene PA14_03400 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008463  PA14_03400  hypothetical protein  100 
 
 
110 aa  229  1e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00000000000000512772  unclonable  2.16388e-22 
 
 
-
 
NC_012560  Avin_49650  hypothetical protein  74.36 
 
 
77 aa  125  1.0000000000000001e-28  Azotobacter vinelandii DJ  Bacteria  decreased coverage  0.0000000079196  n/a   
 
 
-
 
NC_007298  Daro_1323  hypothetical protein  72.97 
 
 
94 aa  117  4.9999999999999996e-26  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000066875  hitchhiker  0.00717507 
 
 
-
 
NC_007520  Tcr_2122  hypothetical protein  70.51 
 
 
80 aa  115  9.999999999999999e-26  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.687947  n/a   
 
 
-
 
NC_011662  Tmz1t_0252  hypothetical protein  71.79 
 
 
77 aa  115  1.9999999999999998e-25  Thauera sp. MZ1T  Bacteria  unclonable  0.000000000534334  n/a   
 
 
-
 
NC_007948  Bpro_0372  hypothetical protein  67.09 
 
 
79 aa  109  1.0000000000000001e-23  Polaromonas sp. JS666  Bacteria  unclonable  0.000000000714353  normal  0.250522 
 
 
-
 
NC_010814  Glov_2852  hypothetical protein  62.34 
 
 
79 aa  104  4e-22  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0962  hypothetical protein  64.29 
 
 
71 aa  97.8  4e-20  Psychrobacter cryohalolentis K5  Bacteria  normal  unclonable  0.0000305628 
 
 
-
 
NC_009524  PsycPRwf_0685  hypothetical protein  73.68 
 
 
71 aa  96.3  1e-19  Psychrobacter sp. PRwf-1  Bacteria  normal  0.557559  normal 
 
 
-
 
NC_009524  PsycPRwf_0725  hypothetical protein  73.68 
 
 
71 aa  95.5  2e-19  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.00269922  decreased coverage  0.000000411311 
 
 
-
 
NC_009052  Sbal_2315  hypothetical protein  72.41 
 
 
71 aa  94.7  4e-19  Shewanella baltica OS155  Bacteria  normal  0.308719  n/a   
 
 
-
 
NC_011663  Sbal223_2135  hypothetical protein  52.56 
 
 
78 aa  94.7  4e-19  Shewanella baltica OS223  Bacteria  normal  0.0862009  normal  0.844988 
 
 
-
 
NC_009438  Sputcn32_2898  hypothetical protein  72.41 
 
 
68 aa  93.6  9e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2357  hypothetical protein  77.78 
 
 
70 aa  93.2  1e-18  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00000771754  hitchhiker  0.0001716 
 
 
-
 
NC_008577  Shewana3_2023  hypothetical protein  48.72 
 
 
78 aa  87.8  4e-17  Shewanella sp. ANA-3  Bacteria  normal  0.220244  decreased coverage  0.0000000187933 
 
 
-
 
NC_013889  TK90_1144  hypothetical protein  47.3 
 
 
73 aa  75.5  0.0000000000002  Thioalkalivibrio sp. K90mix  Bacteria  unclonable  0.0000000171835  unclonable  2.50793e-19 
 
 
-
 
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