Gene Shewana3_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2023 
Symbol 
ID4476388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2418237 
End bp2418473 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content37% 
IMG OID639726606 
Producthypothetical protein 
Protein accessionYP_869660 
Protein GI117920468 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.220244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000187933 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAACAAA CTTTACTCAA TGCCAAAGAA CTTTCTCAAA GGATAAAGTT TAGTGCGGCA 
TATATCAATC ATACATTGAA AGATAGTGTG TTCATTGAGG GTATTCACTA CATCAAACCT
TTTGGTGGTA GAAAAATTTT TTACATTTGG GAAGAAATAG AGATTGAGCT CTTTAGAAAA
GCAGAACGGA GCAAAATCGT TGTACCAATG GCACGCCGAG GTGTTTGCCA TGGGTAA
 
Protein sequence
MKQTLLNAKE LSQRIKFSAA YINHTLKDSV FIEGIHYIKP FGGRKIFYIW EEIEIELFRK 
AERSKIVVPM ARRGVCHG