Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_01470 |
Symbol | |
ID | 4383539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 138130 |
End bp | 138816 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639322677 |
Product | putative transcriptional regulator |
Protein accession | YP_788278 |
Protein GI | 116053841 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.763826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCTT CGTCCAAGCT GGTCAACGCG GTTGCCCAGC GCCTGCTCGA CACCATCGAG CAGGGTCGCT GGGTCGCCGG CCAGATGTTG CCCGGCCAGC GCGAGCTGGC TGAGCAGATG GAAATCAGCC GGCCGAGCCT GCGCGAGGCG ATCATGGTCC TGGAGACCCT GGGCGTGGTC CGTTCGCTGC CGGGCAAGGG CGTGATGGTC CTCGAACGCA GCGAGCCGCT GCGCGAGGTC GCGGCGCCCG GCGAGGCGAC CATGGAAGAC GTCCTGCAAC TGCGCTATGC GCTGGAGCCG TTCATCGTCG GCATCGTCGC GCAGAGCGCC GGGGCGGCGG AGATCAGCGA ACTGCGGCTG TTGCTGCTGG ACCTGCGCGA AGCGGTCGAG GATGGCGACC CGCAGGCTCT GGTGGAGGCC TACACGGCCT TCCACCGGCG CCTGGTGAAG CTCACCTCGA ACCCGATCTT CCTCAGCGTT TCCGAACAGA TCGGCAGCGC CCTGGAACGC AGCGACAACC TGGTCCGCCG CCAGCCGGAA TACGCCGAGG AGATCCTCCA GGAACACGAC GCCATCCTCC GCGCGATCCG CCAGCACGAC AGCGAGCGGG CGAGCCAGGC GATGCGCCAG CACATCCTCA ACGAAGGCGC GCGCCTGAAC ATCGACCTGC GCTTGCCGCA GGTCTGA
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Protein sequence | MFSSSKLVNA VAQRLLDTIE QGRWVAGQML PGQRELAEQM EISRPSLREA IMVLETLGVV RSLPGKGVMV LERSEPLREV AAPGEATMED VLQLRYALEP FIVGIVAQSA GAAEISELRL LLLDLREAVE DGDPQALVEA YTAFHRRLVK LTSNPIFLSV SEQIGSALER SDNLVRRQPE YAEEILQEHD AILRAIRQHD SERASQAMRQ HILNEGARLN IDLRLPQV
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