Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_04601 |
Symbol | recO |
ID | 4719284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 408975 |
End bp | 409754 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640080135 |
Product | putative recombination protein O |
Protein accession | YP_001010776 |
Protein GI | 123965695 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.332062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGGCG AAAGTAGATT AAAAGGTCTC TGTATAAAAG CAAGTCCCTT AGGTGAAAGT GGAAGATTAA TAACTGTTCT TACAGATGAA CAAGGTATTA TTAGGCTTGC AGCACCAGGA GCAAGACGTC CAAAAAGTAG TCTTGCCGCA GCAACCCCTT TAACATATTT AAGTTTTCAG ATCTTTGGAA AAAGAAGCCT TAAGTCTGTT CGCCAGATTA AGATACTCAA AAGCTATAAC GGTTTGGGGA AAAATATTGA ATGTCTTGCA GCAGCCCAAG CAATAACTGA ATTAACTTTT TTATTAGTAG GCAACAACGA TAAGCAAAAG GATTACTTAC CTAGTCTACT TATTCATTTA GATCGAATTT ATGAATATAA AATTGAAAGT GAAGATGACT TCAAAATGCT TTCAATGAGT ATTCAATCTT TAATTCATTT ATTAGCTATT GGAGGAATAA ATATCCCTGT AAATTTTTGC TGTAGCACGG GTGAGCCTAT CATTCCACCT TTAGGAAACT GGGATTGGAA ATGTTCTTAT TTACCGAATG AAGGATTTTC CACGGTAGAA AAGACAGAAA GTGCTTTAAA AGTGAATGCT TCTGAAATTG CTCTTCTACA AAGGCTTATT TTCGCAGAAT TACCAATAAA GTCAAATGGA GAATTATTAG GACCCAAAAA CGTTTGGTTA AAAATATTGT CAATTGTTGA AAGTTGGATT GCGGCTCAAT TAGAAAAAGA ATTATCATCA CTAAAAATGT TAAGAGACTT TTATAGTTAA
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Protein sequence | MLGESRLKGL CIKASPLGES GRLITVLTDE QGIIRLAAPG ARRPKSSLAA ATPLTYLSFQ IFGKRSLKSV RQIKILKSYN GLGKNIECLA AAQAITELTF LLVGNNDKQK DYLPSLLIHL DRIYEYKIES EDDFKMLSMS IQSLIHLLAI GGINIPVNFC CSTGEPIIPP LGNWDWKCSY LPNEGFSTVE KTESALKVNA SEIALLQRLI FAELPIKSNG ELLGPKNVWL KILSIVESWI AAQLEKELSS LKMLRDFYS
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