Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_09631 |
Symbol | recD |
ID | 4776810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 874875 |
End bp | 876605 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640086473 |
Product | exodeoxyribonuclease V 67 kD polypeptide |
Protein accession | YP_001016979 |
Protein GI | 124022672 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGCA GCGATTCATC CACTTGGCCA TCAGGTTTTC CCAGAGCACT GCATCAAACG TTGTTGAGGC GTCTCCCGCC GAAGGCTTCA TCAGTTCATC TCGAGGACTT GGTCAACGCC TTGATGGATG CATTAGCCCG CGGTGAGCTG CAGCTGAATC TCACTGCGAT GTCTCCCCCT CAAGAACTCA AAGCGATGGG ATGGCCTGAG GCTCATTGTC AGGCCCTGCT GGCTAGTGGC TGGCTGGAAG GCGCGGCTTC TCCGATGGTT TTAAACGGTA ATCAATTGAG TTGGCGTCGT TGGCATGGTG ATATGGACGC TGTGATCAAG GAGTTGATCA ACAGGTCAAA TGTTGTTCAA GCGACTTCAA TCTGCACCAC ACCATCCCAT CATCCTGCTT TGCTGGATGG GCTTAACCCT GAACAGCAGG CTGCCGTAGA AGCCATCGAT AACCATGGCG TGGTGTTGTT GAGTGGCGGT CCGGGTACGG GCAAAACCAG CACCATCGTG CAAATGTTGG CGCGGGCAGT CACGTTGAGA CCAGGCCTGA GGATTGGTCT TGCTGCTCCC ACAGGCAAAG CGGCAAGACG CCTAGAGGAG GCTGTTCGCA AGGGGCTGGA GGCAATCCCT CCCACCCAGC GGCAGGCATT GACCAGCCTG CCTTGTAGCA CCCTCCACCG CTGGCTTCAG GCTAGGCCTG GTGGGTTTGG TAGGCATCAA CAACACCCCC TAATGCTTGA TCTCCTCGTT ATTGATGAGA TGTCGATGGT GGAGCTTTCC CTGATGCAGG CGTTATTAAG CGCCCTGCCT ATTGATAGTC AGCTTGTGAT GATTGGTGAC CCGGATCAGT TGCCTCCAGT TGGTAGTGGA GCGGTTTGGC ATCAACTCCA ACAGGCTGAT ATCCGCCAAC AGTTCAATCA TGGTGCCATT CACCTGCATC AGCTCTATCG CAACCGCGGT TCACTAGCGA CGTTGAGCAG AGTTCTGTGT GATCAGGGCC TTTCTGCTTT TTGGCAACAA CTTTCTCTTC TGCCGAAATC AGCGAACGTT GAGCAGCATC AATGCAACCT CAGCAGCATG CCAAGGTTTT TAGTTCAGCA CTTGCAGGAG CACAGCAGAA CACTGCAACG ACTCACTGCC GAACTGATGC TCGAGCTGCC AGATGATGCT TATACGTCAA CCATGCTCAA CACCAATCTT GCCGTTGCAG CTGAGTCTCT GCTGGATTCT CTCGAGCGGT TGATGGTGCT TTGTCCGAAA CGTCGTGGTT TTTGGGGAGT TGATGATGTG CATCGAGCAT TGTTGGGTCA AAGCCTTGAG GCTGGAGTGA TGCGCTGGCC GTTGGGAACG CCGGTGATGT GTTGCGAGAA CCAAGCGGAA CTGGGGCTAG CAAACGGTGA CGTTGGCTTG GTGGTTGGTC AAGGAGACAA TCTGCGCATC CTGTTTCGCG TGATCTCTGA GCAGGGAGGA CTGACCACAC GCTTCATCCA CCCGGCCCGA TTGAGCGTGG TGGAGCCAGC TTTGGCTCTT ACGGTTCATA AGTCTCAGGG GAGTGAGGCT GATCATGTCA TTCTTCTCTG GCCGGAAATA AAAGCTGTGT CGGCTACCAG TGCTGATGGT TTTGAGAGCG CTTCTAGCTT CGAGAGGAAA CTTCTCTACA CTGCTATCAC GCGCGCGCGA CAGCGAGTGG ATCTCGTTAC TGCAATGGCA TCTGGTCGTA GTGACGGCTG A
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Protein sequence | MTRSDSSTWP SGFPRALHQT LLRRLPPKAS SVHLEDLVNA LMDALARGEL QLNLTAMSPP QELKAMGWPE AHCQALLASG WLEGAASPMV LNGNQLSWRR WHGDMDAVIK ELINRSNVVQ ATSICTTPSH HPALLDGLNP EQQAAVEAID NHGVVLLSGG PGTGKTSTIV QMLARAVTLR PGLRIGLAAP TGKAARRLEE AVRKGLEAIP PTQRQALTSL PCSTLHRWLQ ARPGGFGRHQ QHPLMLDLLV IDEMSMVELS LMQALLSALP IDSQLVMIGD PDQLPPVGSG AVWHQLQQAD IRQQFNHGAI HLHQLYRNRG SLATLSRVLC DQGLSAFWQQ LSLLPKSANV EQHQCNLSSM PRFLVQHLQE HSRTLQRLTA ELMLELPDDA YTSTMLNTNL AVAAESLLDS LERLMVLCPK RRGFWGVDDV HRALLGQSLE AGVMRWPLGT PVMCCENQAE LGLANGDVGL VVGQGDNLRI LFRVISEQGG LTTRFIHPAR LSVVEPALAL TVHKSQGSEA DHVILLWPEI KAVSATSADG FESASSFERK LLYTAITRAR QRVDLVTAMA SGRSDG
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