Gene P9303_09631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_09631 
SymbolrecD 
ID4776810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp874875 
End bp876605 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content54% 
IMG OID640086473 
Productexodeoxyribonuclease V 67 kD polypeptide 
Protein accessionYP_001016979 
Protein GI124022672 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGCA GCGATTCATC CACTTGGCCA TCAGGTTTTC CCAGAGCACT GCATCAAACG 
TTGTTGAGGC GTCTCCCGCC GAAGGCTTCA TCAGTTCATC TCGAGGACTT GGTCAACGCC
TTGATGGATG CATTAGCCCG CGGTGAGCTG CAGCTGAATC TCACTGCGAT GTCTCCCCCT
CAAGAACTCA AAGCGATGGG ATGGCCTGAG GCTCATTGTC AGGCCCTGCT GGCTAGTGGC
TGGCTGGAAG GCGCGGCTTC TCCGATGGTT TTAAACGGTA ATCAATTGAG TTGGCGTCGT
TGGCATGGTG ATATGGACGC TGTGATCAAG GAGTTGATCA ACAGGTCAAA TGTTGTTCAA
GCGACTTCAA TCTGCACCAC ACCATCCCAT CATCCTGCTT TGCTGGATGG GCTTAACCCT
GAACAGCAGG CTGCCGTAGA AGCCATCGAT AACCATGGCG TGGTGTTGTT GAGTGGCGGT
CCGGGTACGG GCAAAACCAG CACCATCGTG CAAATGTTGG CGCGGGCAGT CACGTTGAGA
CCAGGCCTGA GGATTGGTCT TGCTGCTCCC ACAGGCAAAG CGGCAAGACG CCTAGAGGAG
GCTGTTCGCA AGGGGCTGGA GGCAATCCCT CCCACCCAGC GGCAGGCATT GACCAGCCTG
CCTTGTAGCA CCCTCCACCG CTGGCTTCAG GCTAGGCCTG GTGGGTTTGG TAGGCATCAA
CAACACCCCC TAATGCTTGA TCTCCTCGTT ATTGATGAGA TGTCGATGGT GGAGCTTTCC
CTGATGCAGG CGTTATTAAG CGCCCTGCCT ATTGATAGTC AGCTTGTGAT GATTGGTGAC
CCGGATCAGT TGCCTCCAGT TGGTAGTGGA GCGGTTTGGC ATCAACTCCA ACAGGCTGAT
ATCCGCCAAC AGTTCAATCA TGGTGCCATT CACCTGCATC AGCTCTATCG CAACCGCGGT
TCACTAGCGA CGTTGAGCAG AGTTCTGTGT GATCAGGGCC TTTCTGCTTT TTGGCAACAA
CTTTCTCTTC TGCCGAAATC AGCGAACGTT GAGCAGCATC AATGCAACCT CAGCAGCATG
CCAAGGTTTT TAGTTCAGCA CTTGCAGGAG CACAGCAGAA CACTGCAACG ACTCACTGCC
GAACTGATGC TCGAGCTGCC AGATGATGCT TATACGTCAA CCATGCTCAA CACCAATCTT
GCCGTTGCAG CTGAGTCTCT GCTGGATTCT CTCGAGCGGT TGATGGTGCT TTGTCCGAAA
CGTCGTGGTT TTTGGGGAGT TGATGATGTG CATCGAGCAT TGTTGGGTCA AAGCCTTGAG
GCTGGAGTGA TGCGCTGGCC GTTGGGAACG CCGGTGATGT GTTGCGAGAA CCAAGCGGAA
CTGGGGCTAG CAAACGGTGA CGTTGGCTTG GTGGTTGGTC AAGGAGACAA TCTGCGCATC
CTGTTTCGCG TGATCTCTGA GCAGGGAGGA CTGACCACAC GCTTCATCCA CCCGGCCCGA
TTGAGCGTGG TGGAGCCAGC TTTGGCTCTT ACGGTTCATA AGTCTCAGGG GAGTGAGGCT
GATCATGTCA TTCTTCTCTG GCCGGAAATA AAAGCTGTGT CGGCTACCAG TGCTGATGGT
TTTGAGAGCG CTTCTAGCTT CGAGAGGAAA CTTCTCTACA CTGCTATCAC GCGCGCGCGA
CAGCGAGTGG ATCTCGTTAC TGCAATGGCA TCTGGTCGTA GTGACGGCTG A
 
Protein sequence
MTRSDSSTWP SGFPRALHQT LLRRLPPKAS SVHLEDLVNA LMDALARGEL QLNLTAMSPP 
QELKAMGWPE AHCQALLASG WLEGAASPMV LNGNQLSWRR WHGDMDAVIK ELINRSNVVQ
ATSICTTPSH HPALLDGLNP EQQAAVEAID NHGVVLLSGG PGTGKTSTIV QMLARAVTLR
PGLRIGLAAP TGKAARRLEE AVRKGLEAIP PTQRQALTSL PCSTLHRWLQ ARPGGFGRHQ
QHPLMLDLLV IDEMSMVELS LMQALLSALP IDSQLVMIGD PDQLPPVGSG AVWHQLQQAD
IRQQFNHGAI HLHQLYRNRG SLATLSRVLC DQGLSAFWQQ LSLLPKSANV EQHQCNLSSM
PRFLVQHLQE HSRTLQRLTA ELMLELPDDA YTSTMLNTNL AVAAESLLDS LERLMVLCPK
RRGFWGVDDV HRALLGQSLE AGVMRWPLGT PVMCCENQAE LGLANGDVGL VVGQGDNLRI
LFRVISEQGG LTTRFIHPAR LSVVEPALAL TVHKSQGSEA DHVILLWPEI KAVSATSADG
FESASSFERK LLYTAITRAR QRVDLVTAMA SGRSDG