Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_14011 |
Symbol | truB |
ID | 5731417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 1268179 |
End bp | 1269108 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641285777 |
Product | putative tRNA pseudouridine 55 synthase |
Protein accession | YP_001551286 |
Protein GI | 159903942 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.276631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGCCA AGTTTGGCTT CTTAGTCATA GACAAACCAG CAGGGGTTAC TTCTCATGAC TGTGTTAGTA GGCTTCGAAA AATTTTGAGA ATAAAACGAG TTGGGCATGG GGGAACACTC GATCCATTAG TAACTGGGGT ATTGCCTATA GCAATTGGTA AGGCGACAAG GCTTTTGCCT TATTTACATA CATCGAAAAA GTATCAAGGC ACAATCCAAC TCGGAGAAAG AACTAATACC GATGACCTAG AGGGAGAAAC AATCAAAAGT AGTCCCTGGC CACAATTAAG TGAAGCCGAT CTAGATAAAT TTCTAGATTT ATTTAGAGGA CGTATTTTTC AAGAGCCCCC TTTATTCTCA AGTGTTCATA TAAATGGAGA GAGAGCTTAT AAAAAAGCAC GAAAAGGAGA AATATTTGAT CTGCCTAGAA AAGAAATAAC CATTTACCAG CTAAAGGTTA ATTCTTGGAA TCAGAGTACT GGAAGATTAG ATTTATATAT TCATTGTTCT TCAGGCACAT ATATCCGCTC TTTAGCAAGA GACCTAGGAG AAAATATAGG ATGTGGAGGT ATGTTATTTA AACTAAGGAG ATTAGAAGCT TTAGGTTTCA ATGAAGACGA AGTAATACCA TTACCAGATC TTAATTATAA TAAGGAAAAG TTGCTTTCAA AAGTTGTTGA TCCTATTCTC TCATTAAATC ACTTATCTAA ATTCCGACTA AAGTGTGAAG AAGATTTTTA CTGGAGAAAC GGTCGTAAAA TAATTACTTC AAATAGCCGT ATTGAGGTAT CTAAAATTAT TGAGAAAGGT GAATTAAATT CATATAAAAA TTTTTTATTG GTTATCAATA ATGACTATTC TATAGCAGGG ATTGCTGAAT GGGTCGATGA TTCAATAATT CAGCCAAAAG TAGTCTTAAA TCCACTCTAA
|
Protein sequence | MDAKFGFLVI DKPAGVTSHD CVSRLRKILR IKRVGHGGTL DPLVTGVLPI AIGKATRLLP YLHTSKKYQG TIQLGERTNT DDLEGETIKS SPWPQLSEAD LDKFLDLFRG RIFQEPPLFS SVHINGERAY KKARKGEIFD LPRKEITIYQ LKVNSWNQST GRLDLYIHCS SGTYIRSLAR DLGENIGCGG MLFKLRRLEA LGFNEDEVIP LPDLNYNKEK LLSKVVDPIL SLNHLSKFRL KCEEDFYWRN GRKIITSNSR IEVSKIIEKG ELNSYKNFLL VINNDYSIAG IAEWVDDSII QPKVVLNPL
|
| |