Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4287 |
Symbol | |
ID | 6208158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5561323 |
End bp | 5564772 |
Gene Length | 3450 bp |
Protein Length | 1149 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641693955 |
Product | TonB-dependent receptor plug |
Protein accession | YP_001821160 |
Protein GI | 182416094 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTA GACCAAGCCA CCACCGTCTC CGCACGCCCC TCGCCGCATC CTTCTTGTTC TGCGCGGCCG CGGCACTCGC TCAAACCGCC ACGCCCGCAG CCGACGCCAG CGCCAAAGAA GACGAGGCGA TCATCCTCTC GCCGTTCGAA GTCGTCGCCG ACACCAAGGG CTACTACTCC GCGAACACGA TGTCCGGCAC CCGCTTCAAC ACGAAGCTGC AGGACCTCGG CGCTTCCGTC AGCGTCATGA CGACGGAGCA GATGCACGAC TTCGCGATGA CCGACCTCAA CGACGTGTTC CTTTACATGG CCGGCGTCGA GGGCACGGGC ACCTACTCGG ACTTCGTGAC CAACCGCAAC GGCGAGGTTC TCGACAACGT CTCGATGAAC CCGACCCAGG CCAATCGCAT CCGCGGCATC TCTGCCGCCA ACATCTCGTA TGGCAACTTC GAGACGATGG CCCGCACGCC GCTCGATCCG CTGGTCCTCG AGGGCGTCGA GGTCAACCGC GGTCCCAACG CGAACGTCTT CGGCCTCGGC AATCCGTCCG GCACGGTCAA TCAGGTCCCG GTCTCGGCCA ATTTGACGCG CGACCGCATG ACCGTGGAAG CCCGCGTCGA CGACTGGGAC GGCCATCGCG CCAGCGTCGA CGTGAACAAG GTCGTGTTGA AGCACAAGCT CGCCCTCCGT TTCAGCGCGC TGGACCAGGA GGAAGGCTTC GTCCGCAAAC CGTCGGGCAT CGATACCCGC CGCTACAACG GCATGATCCG TTTCCAGCCG TTCAAGAATA CCACGATCAA CGCCTCCTAT CTCTACTACG AGAGCGAGGG TCGCCGGCCC AACTACGCCA CGCCCCGCGA CTTTGCCTCT TACTGGTTCG AGAGCGGCAA GCCGGGCTGG GATCCCGTGC GCCAGATGAT CGTCAAGGCC GACGGCACCA CCTACGGTCC GTTCGTCAAC GACAACTTCC TGAACACCGA CATCGGCTAC GCGCTGCAAC GCTCGGGTGG CCAGTTCCAG CGCAGCAACG TCTTCGTCGA TCGCGACGGC ATCACCTACT GGACCACGCC GACCAACAAC ACCGGCACCA CCCCCGCCGC CAACACCGGC ACCGGCGCCA ATTTCATCCG TCTCCTCGGG TCGAGCCCCG GGCCCGGCGG CGCCACCGGC AAGTTCACCA ACCAGCCGCT CTTCAAGGCC GTCCCCGGCG TTTCCAACAA GGACATCTAC GACTACGAAA ACATCAACCT GGCGTCGCCC GACTATCGCT GGGATGAGAG CGAGACCTAT CTGGTCACGC TGGACCAGTT GTTCCTCAAC ACGCCCACCC AGACCCTCGC CGCGCAGCTC GGTTTCTTCC GCGAGGACGC CGATCGCTAT CAGCAGTTCC CCGTCGGCAA TGCCGGCGGC GGCGGCCAGA ACGGCCAGCT CTGGGTCGAC GTGAACAAAT TCAATCTCGA CGGCTCGGTG AATCCGAACT TCGGCCGCAC GTACATCGGC GTCGGTGAGC CGGTCTACTC GTACTATCCG GAAAAGTGGG ACACCTATCG CGGCCAGCTC GCCTACCGCT ACGATTTCAC CCAGTCGGAT CGCTGGACGA AGTGGCTCGG CACGCATCAG CTTACGGGCT ACTCCGAGTA CAAGTACCGC CTCGCCCGGA AATACTCCTA CCGCGACACG ATCACGTCGG ATCATCCTTG GTTGGCGGAG GGCCAGCCCG GCGTCGTCGG GAATTTTGCC CGCGCCAATC AGGCCAACAT CACCGGCGGT CCGCAGGCGG GCCCGAACAT CATTCGCGAG TTCTACCGGT TCTACGTTGG CGACGATCAG GGCGGCGACA TCGACTACGC GCCCGGCCAG ATCATCCCCG GTACCTACGA CTTCGTCTGG GGCACGACCG GCAACTGGCG GCATGAGAAG ACCACCCTTG GACAACTGGC CACCACCAAC AACACCGGCG GTCCGAACAA CCTGAAGCGC ATCATCAAGA CCAACGGCGG CGTGATCCAG AGCCACTGGC TCGACGGCAA GTTCGTCTCC ACCTTCGGCC TTCGCCAGGA CCTGGTCTAC GCGAAGCAGG GCATGACCCC GCAGCAGCTG CTCAACAACA ACACCGAGCA CGACTTCAAG CAGATCAACT CCTGGGAGCC GGACTACCGC TACAGCAGCG GCAAGACCAA GACCATGCAG TTCGTCGCCC GCCCGTTCCG CGATCTCGGT TTCGTGAATC GCTGGGCTCA GGGCACCGGC TTCACCCGGT TCTTCGGCAC GCTCCTTCGC GATTCAGCGA TCACCTATAA CAAGTCCGAC AACTTCATCC CCGCGCCGCC GGCCATCGAC CTGTTCCTCA ACCCGCTGCC GAATCAAACC GGCGAGGGCG AGGACATCGG CGTTTGGTTG AACATGTTCG ACAACAAGCT CGTCGTTCGC GTCAACCACT ACGACAACAC GCAGATCAAC GCCCGCGATG GCGACGCCAA CACGATCGCC CAACGCGTGC TCCGGCTCGA GTTCTATGCC AACGACCGCC ACCAGTTGTT CAACCGCGCC CGCGACTGGC ACCTGCTGCA AAATCCCGCG GCCCCCGTCG GCCAGGCGGA AGACTCCGCC CTGCAGCTGA TGAAGTTGTC CCGCGGTCAA TTCGACCTGC TGCTGGACAA CGCCAACGCC GGCACGCTCG CCGCCACCAA CGACATCCAG GCGAAGGGTA CGGAAATCGA AATCAACTAC AACCCCACGT CCTACTGGAC GATCTCCGCC AACGGCGAGG AGAAGCGCTC CATCAACCAG AACGTCTCTT CGACGGTGCA GGACTGGATC GATCTGCGCA TGCCCATCTG GACCTCGGTC GTCGACCCGA TCAGCGATCC CAACATGATC CTGGGCACGG ATCGAAACAC TCAGGGTTGG GCGACCGATG CCACCAATCC GAACCGCCTC TGGTGGCTCC ACCGCTACGG CGGCGGCTCG CAGAGCCCAG CCGAAAACTT CGCGGTCAAC GTCGAGGCGC CGTGGTCCGT CATCCGCGAG ACCGAGGGCA AGGCCCGTCC GCAGGTCCGG CGCTACGCCG CCCGGCTGAG CACGAACTTC CGGCTCGAAG GCATCACCAG CCACAAGCTG CTCAAGAAGT TCAGCGTCGG TGGCGCCTTC CGCTGGGAGG ACAAGGGCGC GATCGGTTAT TACGGCGTGG CCGACAGCCA AGGCATCTAT CGCAGCCTCG ACGCCAATCG TCCGATCTGG TCTGACGCCA CCACCGACAT CGACGCGTTC ATCACGTATC GGACGAAGCT GTTCCACGAC CGCGTGGGCG CGACGTTCCG GCTCAACGTG CGCAATCTCA CGCGCGGCGG CGAACTGCAG CCGACCGATG CTCTGCCGGA TGGCACGCCG CTGACCTTTC GCATCATCGA CCCGCGTCAG TTCATTCTGA CCGCCAGCTT CGATCTCTAG
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Protein sequence | MNRRPSHHRL RTPLAASFLF CAAAALAQTA TPAADASAKE DEAIILSPFE VVADTKGYYS ANTMSGTRFN TKLQDLGASV SVMTTEQMHD FAMTDLNDVF LYMAGVEGTG TYSDFVTNRN GEVLDNVSMN PTQANRIRGI SAANISYGNF ETMARTPLDP LVLEGVEVNR GPNANVFGLG NPSGTVNQVP VSANLTRDRM TVEARVDDWD GHRASVDVNK VVLKHKLALR FSALDQEEGF VRKPSGIDTR RYNGMIRFQP FKNTTINASY LYYESEGRRP NYATPRDFAS YWFESGKPGW DPVRQMIVKA DGTTYGPFVN DNFLNTDIGY ALQRSGGQFQ RSNVFVDRDG ITYWTTPTNN TGTTPAANTG TGANFIRLLG SSPGPGGATG KFTNQPLFKA VPGVSNKDIY DYENINLASP DYRWDESETY LVTLDQLFLN TPTQTLAAQL GFFREDADRY QQFPVGNAGG GGQNGQLWVD VNKFNLDGSV NPNFGRTYIG VGEPVYSYYP EKWDTYRGQL AYRYDFTQSD RWTKWLGTHQ LTGYSEYKYR LARKYSYRDT ITSDHPWLAE GQPGVVGNFA RANQANITGG PQAGPNIIRE FYRFYVGDDQ GGDIDYAPGQ IIPGTYDFVW GTTGNWRHEK TTLGQLATTN NTGGPNNLKR IIKTNGGVIQ SHWLDGKFVS TFGLRQDLVY AKQGMTPQQL LNNNTEHDFK QINSWEPDYR YSSGKTKTMQ FVARPFRDLG FVNRWAQGTG FTRFFGTLLR DSAITYNKSD NFIPAPPAID LFLNPLPNQT GEGEDIGVWL NMFDNKLVVR VNHYDNTQIN ARDGDANTIA QRVLRLEFYA NDRHQLFNRA RDWHLLQNPA APVGQAEDSA LQLMKLSRGQ FDLLLDNANA GTLAATNDIQ AKGTEIEINY NPTSYWTISA NGEEKRSINQ NVSSTVQDWI DLRMPIWTSV VDPISDPNMI LGTDRNTQGW ATDATNPNRL WWLHRYGGGS QSPAENFAVN VEAPWSVIRE TEGKARPQVR RYAARLSTNF RLEGITSHKL LKKFSVGGAF RWEDKGAIGY YGVADSQGIY RSLDANRPIW SDATTDIDAF ITYRTKLFHD RVGATFRLNV RNLTRGGELQ PTDALPDGTP LTFRIIDPRQ FILTASFDL
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