Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4210 |
Symbol | |
ID | 6207139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5436051 |
End bp | 5436833 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641693878 |
Product | ribonuclease PH |
Protein accession | YP_001821083 |
Protein GI | 182416017 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.295037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.959697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTCG CCCGTGTCGC CGCTACGGTC GGCCCCATGC CTTCCCCGCG CTCCGACGGT CGCCATCCCG ATCAGCTTCG CCCCATCACG TTCGAAGCGA ACATCGCGCC CTACGCCACC GGCTCGGTGC TGGTGTCCTT CGGCTCCACG CGCGTGATCT GCGCCGCAAT GATCGAGCCC AAGGTCCCGC TGTGGATGCG TCAGCAGGGC GTCCGGGGCG GCTGGCTCAC CGCCGAGTAT TCGATGCTCC CGTACTCGAC CCTCGACCGC AAACCGCGCG ACATCAGCAA GGGCAAGCTC GACGGGCGCA CCGTCGAAAT CCAGCGGCTC ATCGGTCGTT CGCTGCGCGC CGTGGTCGAT CTGATGAAGC TCGGCGAAAA CACGCTGTGG ATCGACTGCG ACGTGCTGCA GGCCGACGGC GGCACGCGCA CCGCTTCCAT CACCGGCGCC TACCTCGCCA CCCGGCTCGC GGTCCAGCGG CTCGTCGACG CCGGCAAGCT CGCGGAAAAT CCCGTGCTCG ATTCCGTCGC CGCCGTTTCT GCCGGGGTCT GCGGCGGACA GGAGCTGCTC GATTTGAACT ACGTCGAGGA CAAGGACGCG GAGGTCGACG CTAACATCGT GATGACCGGC CGCGGTCAGT TTGTGGAGAT GCAGAGCTCG GGCGAGGAAG CGACGTTCAC CCACGAGCAG CTGCTCAGCC TCACTGCGCT CGCCCAAAAA GGCCTGAAGG AAATCGCCGC GCTGCAGACC GCGTTCCTGA CCAAGTGCCT GCTCGCGCGG TAG
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Protein sequence | MALARVAATV GPMPSPRSDG RHPDQLRPIT FEANIAPYAT GSVLVSFGST RVICAAMIEP KVPLWMRQQG VRGGWLTAEY SMLPYSTLDR KPRDISKGKL DGRTVEIQRL IGRSLRAVVD LMKLGENTLW IDCDVLQADG GTRTASITGA YLATRLAVQR LVDAGKLAEN PVLDSVAAVS AGVCGGQELL DLNYVEDKDA EVDANIVMTG RGQFVEMQSS GEEATFTHEQ LLSLTALAQK GLKEIAALQT AFLTKCLLAR
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