| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3473 |
|---|
| Symbol | |
|---|
| ID | 6208020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4517507 |
|---|
| End bp | 4518376 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641693139 |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_001820350 |
|---|
| Protein GI | 182415284 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.817877 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC GCCCTCTGCC ACTCTCCGAT CTCGTCGAAC AGGCGCGCCA TCTTCCCTGC
GCTCCGTGGC TGCTGCCGAA GCTGCTCGAG CTGCTCAACG ATCCCGCCGC CGCCGCCGAG
CAGATCGAAG CTTTGATCAA GCTCGATGCG GGTCTCGCGA CCGCGACGCT CCGGCTGGCC
AATTCCGCGT ATTTCGGCAA CGCGACGCCG TGCGACACAT TCAGCGATGC GATCGTGCGG
CTGGGCTTTC GTGAGCTCTA TCGGCTCGTC AGCACGACGA TGGCCGGCCG GTGGCTCAAC
CATGCCGTGA GCGGTTACGG CTGGGAGCCG GGTGATCTCT ATCGGCATTC GCTCACCGTG
GCGGTGGCGG CGGACCTGAT CGCGCAACAA ACCGGGCGCG TGCAGCCGGA GCTGGCTTAC
ACCGGCGGAC TGATTCACGA CGTTGGCAAG CTGGCGCTCG CGTTCGTGCG CGGCGATGAC
TTCGAGGCGG TTCGTGCCCA CCAGGCCGCG CAGCGCTGTG CGTGGCGCGC GGCCGAGCAC
CACATATTCG GTTACGACCA CACCGACGTC GCCGGCGAGT TGCTGCAGAG CTGGACGTTC
CCGACGAGCT TGATCGAAAT CGTGCGCTTT TACCCGCGCC CCGCGCTGGC TGACCAGGAG
CACCGCTCGC TGGTCACGCA CATCCACGCC GCCAAGCACC TCGCGCTCTG CATCGGCACC
GGCGTCGGCG AAGACGGCTT CCACACCGAG ATCGACGAGT CGGCGCTGCG GGAAGAAGGC
ATCACGCCCG CGATCCTCGA CGGCCTGCTG CCGGAGGTGC TGATCACGGC CACCAAGCTG
CTCGAGGAAG AAGCGACGCG CGCCCCCTGA
|
|---|
| Protein sequence | MTQRPLPLSD LVEQARHLPC APWLLPKLLE LLNDPAAAAE QIEALIKLDA GLATATLRLA
NSAYFGNATP CDTFSDAIVR LGFRELYRLV STTMAGRWLN HAVSGYGWEP GDLYRHSLTV
AVAADLIAQQ TGRVQPELAY TGGLIHDVGK LALAFVRGDD FEAVRAHQAA QRCAWRAAEH
HIFGYDHTDV AGELLQSWTF PTSLIEIVRF YPRPALADQE HRSLVTHIHA AKHLALCIGT
GVGEDGFHTE IDESALREEG ITPAILDGLL PEVLITATKL LEEEATRAP
|
|---|
| |