| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3260 |
|---|
| Symbol | |
|---|
| ID | 6207659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4267248 |
|---|
| End bp | 4268543 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641692926 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001820139 |
|---|
| Protein GI | 182415073 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0706269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.158232 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCG CTCCCCTTCT GCCGACCGCC GATCTGTTCA TCGAGCCGCC CGCCCGTAGC
GGCGACGACG TGGAATACGT CTGCCGGCTC GCCGAGCCGC GCGGGACCAC ACACCGGATC
TGGTTTCGCT TTCCCGCCAG CTGCGAGCCG CTGCTGACGC GGCGGGCCGA TCCGTTCGTG
CTCGCCACGC TGATCTATAG CCTCGGCCGG ATTGGCCGGC TCGAGATTCA TGGCGCCGTC
TCGCAGGGGC TGCTCGCCAA CGTCGCCGAT TTTCAATCCG CCTACGCGGC GTTTCATCGC
GTGGCCGCTG CACCGGTGCG GCTCGTGGCC CGCGAGGTCG TCAGCGCCGC GACGGCGAAC
CGGACGGATG GAGGAATCAC CGCGTTCTCC GGCGGCGTGG ACAGCTGCTT CAGCGTTTTC
CGGCACACGT CGCTCTCCGA GCTGGAGCCC AAGCGGCCGC TGCGCGCGGC GCTGATGATG
CACGGCTTCG ACATTCCGTT GGCCGAACCG GCGATGTTCG CCCGCGCCGC GACGCGCGCG
CGCACGCTCA CCGAGTCGGC GGGCGTCCGG CTCTTTACCG GCGCCACGAA CCTGCGCACG
CTGCCGGGGC ATTGGGAGGA CACATTCGGT ACCGCGGTGG CCGCTGTGCT CACGTTTTTC
CAACCCGCGT TTGTTTTCGG CCTCGTTCCC TCGGCTCAGC TTTGGCAACA GGTTCATTTC
GATCACGGCT CGAATCCGCT GACCGACCCG CTGCTCTCGA GCGGGGCGTT CGCGATCGTG
CACGACGGCA CGAGCTTCGG TCGGATCGAC AAGCTCCGCG CGCTGGCCGC GTGGCCCGAG
GCGCTGCGGC TGATGCGGGT GTGCTGGGAA GGACGTCACC TCGACGCCAA TTGCGGCCGC
TGCGAAAAAT GCCTGCGCAC GATGCTGATG CTCCGGATCT GCGGCGTCGA CGCGCCCGCC
GCATTTCCGC CGCTCGACCT CGCCGCGCTC GACCGGCTGG TCATCCGCAC GCGCGGCGGC
TTGGATGAGT TTGCCTACCT GATCAGCGAA GCGCGGCGCC GTAACATCAC CGAGCCGTGG
GTGGCTGCCG CCGAAGGCGC GGTGCGGCGC AGCCGGCGTG CTGCCTGGCT CAAGGCACGC
GCGCGTCGCG CCGCGGGCTG GCTGCCTGCC GCGTGGCGCA ATCGGCTGCA ACGTGTCCGC
CACCCGGCAG TCGCGACGGC GAGTGCGCCA CCGCTCGCGG AGGCTTCAAC CCAACCGGCG
CCCGTCGCCA CGGAAGAGAT GCTCTCACGG CCATGA
|
|---|
| Protein sequence | MSAAPLLPTA DLFIEPPARS GDDVEYVCRL AEPRGTTHRI WFRFPASCEP LLTRRADPFV
LATLIYSLGR IGRLEIHGAV SQGLLANVAD FQSAYAAFHR VAAAPVRLVA REVVSAATAN
RTDGGITAFS GGVDSCFSVF RHTSLSELEP KRPLRAALMM HGFDIPLAEP AMFARAATRA
RTLTESAGVR LFTGATNLRT LPGHWEDTFG TAVAAVLTFF QPAFVFGLVP SAQLWQQVHF
DHGSNPLTDP LLSSGAFAIV HDGTSFGRID KLRALAAWPE ALRLMRVCWE GRHLDANCGR
CEKCLRTMLM LRICGVDAPA AFPPLDLAAL DRLVIRTRGG LDEFAYLISE ARRRNITEPW
VAAAEGAVRR SRRAAWLKAR ARRAAGWLPA AWRNRLQRVR HPAVATASAP PLAEASTQPA
PVATEEMLSR P
|
|---|
| |