| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2940 |
|---|
| Symbol | |
|---|
| ID | 6204344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3767189 |
|---|
| End bp | 3767809 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641692605 |
|---|
| Product | CheC, inhibitor of MCP methylation |
|---|
| Protein accession | YP_001819821 |
|---|
| Protein GI | 182414755 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.569943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTGA CCAGCGGCCA GGTCGACGCG CTCACCGAAC TGATCAACAT CGGTTACGGA
CGCGCGGCGG GATCCCTGTC GGAACTCACC GGCTACCGTA TCGCCCTCGA GGTGCCGCAG
GTCGCGATCC ACGAGATCGA GGCGCTGGCG CCATTGCTCG AACGCGTGCT GCGGGCGGAC
TGCGCTGCCG TGAGCCAGGC CTTCGACGGG CCGATCTCGG GGCGCGCGCT GTTGATGCTG
GATGAGCGGG CCGCCGCCGC GCTCAGCCGC TTGCTGATCG AGGACGGCGT GCCCGGCACG
CGATTGGACG CGACGGCGCG CGAAGTGGTC ACGGAGGTGG GCAACATTCT GCTCAACGCG
TGCCTGGGCG TATTCGGCAA TTTGTTGAAC GTGCACGTGT CCTTTGCCGT GCCGCAGTTT
CATCTGGAGA GCGTGACTGG CGTGCTGAAA TCGGTGGCCA CCGAAGCGGC CGAGCAGCTG
CGTTACGCGC TCATGATTCA CACCCGCTTC TCGATCCGCA CCGGCGATGT GAACGGATAT
CTGGTCATCA TCCTTGGCGT CGCCTCGCTC GACACGTTGT TGGTGGAGTT GTCGAAGTGG
GAGCACCAGC AGGCCCAATG A
|
|---|
| Protein sequence | MELTSGQVDA LTELINIGYG RAAGSLSELT GYRIALEVPQ VAIHEIEALA PLLERVLRAD
CAAVSQAFDG PISGRALLML DERAAAALSR LLIEDGVPGT RLDATAREVV TEVGNILLNA
CLGVFGNLLN VHVSFAVPQF HLESVTGVLK SVATEAAEQL RYALMIHTRF SIRTGDVNGY
LVIILGVASL DTLLVELSKW EHQQAQ
|
|---|
| |