| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2488 |
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| Symbol | |
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| ID | 6206807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3204103 |
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| End bp | 3204693 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641692147 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001819370 |
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| Protein GI | 182414304 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.486389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.441144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTTCC GCCGTGCCTC GCTGTCCCCC CTCGCCGCTG CGGTTCTGGC TCTCGCGGGC
TGTGTGACGG ACGGCACCGT CGGCGGCCCA AATCCTGAGA TCCCGTCCGC CACCTCCTCG
GCTCAACTGC GCGGCGGCGA CAGCCTCACG GTTTCGCTGC AGGGTGTGCC TGATCCCAGC
ACCCAAGCCG TGCAGATTGA CGATCAGGGC AGCATCAGCC TGCCATTCAT CGGACCGGTT
TCCGCCGCGG GTCTAAACGC CGGCGAACTC GCCACGCGGA TTCGCGAAAC TTACCTCGCG
CGAAAAATCT ACAACGCCGT CGACGTTTCG GTCTCCGTCA CCGAACGGTT CGTGTATGTC
GGCGGCGAGG TGATGCGGCC GGGCCGGATC GTGTGGACGC CTGATCTCAC CGTCGCCAAA
GCGATCCAGG CCGCCGGCGG CTTCAGCCTT TATGCGAAGG AAACGCGCGT CAGCCTCGTC
CGCGACCAGA AGAGCTACGA CGTCGACGTG AAGCTCGCGC AAAAACGCCC GGAGCAGGAT
CCGCGACTCG TGCCCGGCGA CGCGATCCAA GTGCCGCGCT CGCCGTTTTA G
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| Protein sequence | MRFRRASLSP LAAAVLALAG CVTDGTVGGP NPEIPSATSS AQLRGGDSLT VSLQGVPDPS
TQAVQIDDQG SISLPFIGPV SAAGLNAGEL ATRIRETYLA RKIYNAVDVS VSVTERFVYV
GGEVMRPGRI VWTPDLTVAK AIQAAGGFSL YAKETRVSLV RDQKSYDVDV KLAQKRPEQD
PRLVPGDAIQ VPRSPF
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