Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1956 |
Symbol | |
ID | 6206296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2452503 |
End bp | 2454137 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641691605 |
Product | cyclic peptide transporter |
Protein accession | YP_001818839 |
Protein GI | 182413773 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.154959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTC TCCGTTTTCT TCAGCGCGAA TCCGGTGCGA TCGGCCGTCG GATCGCTCTC GTCACGCTGC TTGGCGGAGC GGTGAGCGGG CTGATGGTGA CCATCATCCT CGGCGCGGCC TCGGCGGCGA CGGCGCAAGG GGAGTCCTTC CGCTACCTGC TGTTGTTCCT CATCGCGCTC GTCGCGATGA TGACCGCCAA ACGCTACAGT CTGCGCCATA CCGGCGAGCT GACGGAAGGC ATCGTCGAGC GGCTGCGCTT GCGCGTCGCG GACAAGATTC GCCGGGCCGA GCTGCTGTTT TTCGAGTCCA CCGGGCCCGC GCAGTTCACG ACGCTGCTGA CGAAAGAGAC GCAGACGATC TCCTCCACCG TGTCGATGGC GATCAACGCC TCGGCTTCGG CCGTGATGCT GCTGGTGGCG TTTCTGTTCA TCGCCTACCT GTCGGTCCCC GCGTTCCTGC TGACGCTCGG CGCCATGGCC ACGGCGGTGA TTGCCTACCG CTGGAGTTTG AGTACCGCCG AGCCGCAGCT GCAGCAGACG CTCGAGATGG AGGTCGGCTT TTTCGGGCTG ATCGAACACC TGCTGGATGG TTTCAAGGAG CTGAAGGTCG ACGCGCGCAA GAACCGCGAT CTGTTCGACA ACCACCTGCG CCCGCTCGCC ACGAAGGTCA CGAACCTGAA GGTCGAAACG AACAACAGCT TCGTCACCAC CACGCTGATC ACCCACTCCG CGTTCTACGG GCTGCTTGGG GTGATCATCT TCCTGCTGCC GCGGTTCGCA CAGGCCGAGG GCTCCGTGGT GATCAAGATC TCCACGGTGA TCCTGTTCAT TTTCGGCCCG ATGGCCGAAG TGGTGGGCGT CGTGCCCTAC ATCGCCAAGG CCGCCGTCGC GATCCGCGCC ATCGAGACGA TGGAGTCGAA ACTGGATGAC GAGCTGAGCC ACGTGCCGAC GGTGAACTTC GCCGACGATC CCGCGCCGCT GCCGCTGCGC GAGATCGAGG TCCGCGATCT GGTGTTCTCC TACAAGAATC CGGATGGGAC GCCCGGCTAC ACCGTCGGTC CGCTCAACGT CACGATTCCG CTGGGCGAGG TGTTGTTCAT CCAGGGCGGC AACGGCGGCG GCAAGTCGAC GTTCCTCAAG CTGCTCACCG GATTGTACCA GCCGGCGGGC GGCGCGCTGT ATCTCAACGG CCACCGGCTG CAGCCTTCGC AGTATCATCG CTACCGGAAC ATGTTTTCCG TGATCTTCAC GGACTTTCAT CTCTTCGACC GGTTGTACGG ACTGCAAAAC GTCGACGAGG ACCGGCTGAA CGAGCGGCTG CAGGAGATGG AGCTCGACGC CAAGACGAGC TATTACGAGG GCCGGTTCTC GACGCTCAAC CTCTCCACCG GGCAGCGCAA GCGGCTGTCG CTGATCATCG CGCTGCTCGA CGACAAGCCG ATCCTGGTCT TCGACGAGTG GGCCGCGGAT CAGGACCCGA TTTTCCGCCG TCATTTCTAC GAGGTGATTC TCCCGGAGCT GAAGCGCCAG GGGAAGACGA TCATCGCGGC GACCCACGAC GACCGGTACT TCTCGGCGGC CGATCGCGTA TTGAAGATGG AATACGGCCG CTTCGTGAAC GGCGCGCCGA AATAG
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Protein sequence | MEFLRFLQRE SGAIGRRIAL VTLLGGAVSG LMVTIILGAA SAATAQGESF RYLLLFLIAL VAMMTAKRYS LRHTGELTEG IVERLRLRVA DKIRRAELLF FESTGPAQFT TLLTKETQTI SSTVSMAINA SASAVMLLVA FLFIAYLSVP AFLLTLGAMA TAVIAYRWSL STAEPQLQQT LEMEVGFFGL IEHLLDGFKE LKVDARKNRD LFDNHLRPLA TKVTNLKVET NNSFVTTTLI THSAFYGLLG VIIFLLPRFA QAEGSVVIKI STVILFIFGP MAEVVGVVPY IAKAAVAIRA IETMESKLDD ELSHVPTVNF ADDPAPLPLR EIEVRDLVFS YKNPDGTPGY TVGPLNVTIP LGEVLFIQGG NGGGKSTFLK LLTGLYQPAG GALYLNGHRL QPSQYHRYRN MFSVIFTDFH LFDRLYGLQN VDEDRLNERL QEMELDAKTS YYEGRFSTLN LSTGQRKRLS LIIALLDDKP ILVFDEWAAD QDPIFRRHFY EVILPELKRQ GKTIIAATHD DRYFSAADRV LKMEYGRFVN GAPK
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