Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1472 |
Symbol | |
ID | 6205492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1835434 |
End bp | 1837248 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641691113 |
Product | 60 kDa inner membrane insertion protein |
Protein accession | YP_001818356 |
Protein GI | 182413290 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.577642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGA AGAACACTGT CATCGGCGTC CTGCTGCTCC TCGCCGCATT CGCCAGCCTT TACCTCGGCC AGCGACTTTC GCCGCAGCGA AGCGCACAAC CCACTCCGAC GATCAGCACG CCCCAGACCG CGGCCACCGG CACCGCGCCG GCGAACGCCC TGCCGACGGG CACGCCGTCC GCGCCCGTGC CGTCGACGGC GTTCGCCTCG GTCGCGGAGA ACGATGGCTC CGCCACGACC GTCACCCTGC AGAATGATTT CATCGCGGCC CACGTCACGG ATTTCGGCGG CGCGCTGCAC GATGTCGCGC TGAAGAAATA TCCTGCGGAG CGGGATCGGC CGGAGCCGTT CGTCTTTAAC GCGCTGCACG CCGACCCGAT GCTGGCGCTC GTCGATTTCC CCGGGCTCGA CCGGCAAACG CGTTTCGAAC TCGTTTCGCA TACGCCGACG TCGGCGGTTT ATCGCGCCGT GCTGAACGGC CAGGTCGAGG TCACGCGGCA CTACTCTGTT CTGCAGGCCG GCGACAAGTC CGGCGATCCC TACGTCGTGC GCCACGAGAC CACGTTCCGC AACCTGAGCG ATCAGACGGT GACGCTGCCG CGGGTCGCGC TGAGCCTCGG CACCGCCGCG CCGACGGATG CCAACGATCC GGGCATCCGG CTCACCACCG GCTACTCGAA TGGCGACGAC CAGAACTTCT TCGCGCGCTC CAAGCTGGAG GGCGGCAACG GATTTTTCGG CATCGGCGCC AGCGAACCGA AGCCGCAGAT CCTCACGGGC GGCCCGATCG CGTGGGCCTG TGTCAGCAAT CAGTTTTTCG CCAGCATCCT CACTCCGGAC CAACCCGGCT CGGGCCTCAT CACCCGGCGC GTGAAACTGC TGCCGATGCT GCCGGACGAG AACCGCAACG CTTACGGCAT CACGAGCGCG GCGCAGTTCG ACCTCACGCC GCTCGCCGCC AACGCCGAGA CCAAGCTCGG GGCGGACTTC TACGTCGGGC CGAAGGAATA TCGCCGGCTG GCGAACGGCG ACGTGTTCAA GAAGGACCAA GACAAGGTCA TGCAGTTCGG GTTCTTCAAG TTCTTCAGCC AGATCCTGCT CACGCTCATG ACCTGGGTGC ATGGCTGGTT CCCGAGCGCG GCGTGGGCTT GGGGCTGGGC GGTCGTGATC ACGACGCTCA TCCTGAAAAT CATCTTCGTG CCCTTCACGC TCGCGGCGTC GCGCTCGGCC AAGCGCATGG CCAAGATCCA GCCGGAGATG CAGGCGGTCC GGGAGAAATT CAAGGACAAC CCGCAGAAGC TGCAGGCGGC GACGATGGAG CTCTTCAAGA AGCACAAGGT GAATCCGATG GGCGGATGCT TCCCGATCCT GATCACGATT CCGTTCTTCA TCGGTTTCTT CCAGATGCTC CAGAGCGCGG CTGAACTGCG GTTCCAGCCC TTCCTCTGGG CCTATGATCT GTCGGCGCCG GACACCGTGC TGCACATCGG GCCATTCCCG CTGAACATCA TGCCGCTGCT GATGGGCGCC ACGATCGTCA TCCAGATGCG GCTCACGCCT TCGCCCGCCG TGGATAACAT GCAGGTGAAG ATGATGAAGT TCATGCCCTA CATCATGACG ATGTTCTGCT ACACGTTCTC CTGCGCGCTC GCGCTCTATT CGACCGTCAA CGGCATCTTC ACCATCGGTC AGCAGCTCGT GATCAACCGC ATGAAGGACA ATCCCGGCCC CGTCGGCCCC GGCACCGCTG CCGCCACGAC CGCGGCAGCG TTCACCAAGT CCACCAAGAA CGTCACGCCG AAGAAAAAAA AATAA
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Protein sequence | MDKKNTVIGV LLLLAAFASL YLGQRLSPQR SAQPTPTIST PQTAATGTAP ANALPTGTPS APVPSTAFAS VAENDGSATT VTLQNDFIAA HVTDFGGALH DVALKKYPAE RDRPEPFVFN ALHADPMLAL VDFPGLDRQT RFELVSHTPT SAVYRAVLNG QVEVTRHYSV LQAGDKSGDP YVVRHETTFR NLSDQTVTLP RVALSLGTAA PTDANDPGIR LTTGYSNGDD QNFFARSKLE GGNGFFGIGA SEPKPQILTG GPIAWACVSN QFFASILTPD QPGSGLITRR VKLLPMLPDE NRNAYGITSA AQFDLTPLAA NAETKLGADF YVGPKEYRRL ANGDVFKKDQ DKVMQFGFFK FFSQILLTLM TWVHGWFPSA AWAWGWAVVI TTLILKIIFV PFTLAASRSA KRMAKIQPEM QAVREKFKDN PQKLQAATME LFKKHKVNPM GGCFPILITI PFFIGFFQML QSAAELRFQP FLWAYDLSAP DTVLHIGPFP LNIMPLLMGA TIVIQMRLTP SPAVDNMQVK MMKFMPYIMT MFCYTFSCAL ALYSTVNGIF TIGQQLVINR MKDNPGPVGP GTAAATTAAA FTKSTKNVTP KKKK
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