| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1384 |
|---|
| Symbol | |
|---|
| ID | 6205261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1732137 |
|---|
| End bp | 1733240 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641691026 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_001818269 |
|---|
| Protein GI | 182413203 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.934353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGGC CCACGCTCAA CGACATCGCC CGTCAGGTGG GTTTTTCCAA GAACACCGTC
TCGCTCGCGC TCCGCGGTGA TCCGCAGATC CCCGAGGTGA CGCGGGAGCG CATCCGACGG
GTGGCAGACG AGGTGGGCTA CCAGCCGAAC GCGATCGTCT CGCACCTGAT GGCGCAATTG
CGCGCGAGCC GGACGACGCG GCTCCAGGCG AAGCTGGCGC TGGTCAATGC GAACCGCGAT
CCGGATGCGT TCCGGACCCA TCCGACGATT CCGACGTATG TGGACGGTTG CGAGAGCCGG
GCGGCGAAGC TGGGGTACAG CTTCGATCGG TTCTGGCTCC ATGATCCCAC CCTGAACGCG
TCGCGTTGGC TGCGTATCCT GCTCACGCGC GGCATCAAGG GCCTGGTGCT CGTCGGGTTG
ATGGACACCA ATCATCTGCC GGACGAACTT CGTGGCGTGT GGGAGCAGTT GCCGACGGTG
GTGACGGGCG TGCGCACGCG GGATCCGGCG CTGTCATTCT GCTCCGTGGA TCATCACAAT
CTCGCGCTGA TGGCGTTCGA GCGGGCGGCG GCGCTGGGCT ATCGCCGGCC GGGGCTGGTG
CTGGACGACG TGATCGACGC GCTGGTCGAG CGGCGGTTCT CGGCCGGGTA TTTCACCGGG
CAGCGCACGC TGCCGCGCGC GCAGCACATC CCGATTTTCA GCGAGGTGGC GGCGGCGCAG
CAGGATCCGG CGCGGTTTCA CGCGTGGCTG AAGCGTTACG AACCCGACGT GGTGTTCACG
CTCTACAACA ACGTCCTCTC CTGGTTGAAA GCGGCGGGTC GGCGCGTGCC GCAGGATCTC
GGCGTGATCC AGCTCGAGTG GCGCTCGACG CGGCCGGAGA TCGCCGGGCT GAACCAGCAC
AATTTTGTGA CCGGCGAGGC GGCGGTGGAC ATGGTGGTCA GCCAGATTCA CAACAATGAG
ACCGGCGTGC AGGAGTTTCC GCGGGCGACG TTGATCGGCG CGACTTGGGT CGACGGTCCC
AGCGTGCGGG AACAACGGGC TGGCGCGAGT GAGGCGCCGG CGAAACGGCG AAAGAAGGCG
CAGAAGGAAA CCGTGAAGAT GTAG
|
|---|
| Protein sequence | MPRPTLNDIA RQVGFSKNTV SLALRGDPQI PEVTRERIRR VADEVGYQPN AIVSHLMAQL
RASRTTRLQA KLALVNANRD PDAFRTHPTI PTYVDGCESR AAKLGYSFDR FWLHDPTLNA
SRWLRILLTR GIKGLVLVGL MDTNHLPDEL RGVWEQLPTV VTGVRTRDPA LSFCSVDHHN
LALMAFERAA ALGYRRPGLV LDDVIDALVE RRFSAGYFTG QRTLPRAQHI PIFSEVAAAQ
QDPARFHAWL KRYEPDVVFT LYNNVLSWLK AAGRRVPQDL GVIQLEWRST RPEIAGLNQH
NFVTGEAAVD MVVSQIHNNE TGVQEFPRAT LIGATWVDGP SVREQRAGAS EAPAKRRKKA
QKETVKM
|
|---|
| |