Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0628 |
Symbol | |
ID | 6206771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 766338 |
End bp | 767246 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641690251 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_001817518 |
Protein GI | 182412452 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAACT GCCCGAGAGT CATGGTGTGG CTGGCGTTGC TCGCACTCGC CCTGACCGCC GGCTGCGAAC GCGGCGACCC GCAGGCCATC TCGTCGGAAG CCGACGAACC GAATTTTCGC CACGGCCAGC AGTTGGTGAA ACAGGGGCGC AGCCAGGAGG CGCTCGCGGC GTTTCTCAAG GTCATCGCCC GTCGCGGCGA ATCGGCGCCC GAGTCGCACC TCGAAGCGGG GCTGCTCTAT CTCGACCAGG TCAAGGATCC GCTCGCGGCG ATCTACCATT TTCGCAAATA CCTCGAGCTG ATGCCGAACT CGCGCCAGGC GGTGTTCGTC AAGGGCCGCA TCGAGGTGGC CAAACGCGAG TTTGCGCGCA CGCTGCCCGC CCAGCCGCTC GAGAGCCAGA GCGGGCTCGA GTTGCTCGAC AGAATTGAAA AGCTGCAGCG GGAGAACGAG CAGTTGCGGG CGGAGATCGC CATGCTGCAT GAGAACGTGC CCGGGCCGGT CAACCGTTCG CGGGCGATGC TCAACCAAGC GGGCGCCGCC GCCGGCGTCA GCGCGAGCGA AGAACCCGAG CGGCCCCGAC CGTTTTTCAC GCCCACGATC GAATCGCCGG CAGCGGGGGC GGATTCGCCG GTCTCGCTTG CGCCCGAGCA GCCGGCCGAG GCTGACGTCC GCGAGCCGCT CATCCAGGCG GCGCCCGTGC CCGCCACCCG TCCGCCACCC TCGCGGCCTA CGCCGCCCGC GACCGAAGGT GGCCGGCGAC ACGTGGTCGT GAAAGGCGAC ACGCTGTTCA GTCTGGCCCA AAAATATTAT GGCAACCGCT CGCGTTGGCG GGACATCTAC GCGGCCAACC GGGACGTATT GCCGAGCGAA AACTCGCTGC GGCTTGGGAT GGAACTGAAA ATCCCGTGA
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Protein sequence | MRNCPRVMVW LALLALALTA GCERGDPQAI SSEADEPNFR HGQQLVKQGR SQEALAAFLK VIARRGESAP ESHLEAGLLY LDQVKDPLAA IYHFRKYLEL MPNSRQAVFV KGRIEVAKRE FARTLPAQPL ESQSGLELLD RIEKLQRENE QLRAEIAMLH ENVPGPVNRS RAMLNQAGAA AGVSASEEPE RPRPFFTPTI ESPAAGADSP VSLAPEQPAE ADVREPLIQA APVPATRPPP SRPTPPATEG GRRHVVVKGD TLFSLAQKYY GNRSRWRDIY AANRDVLPSE NSLRLGMELK IP
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