| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0486 |
|---|
| Symbol | |
|---|
| ID | 6208149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 571820 |
|---|
| End bp | 573112 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641690108 |
|---|
| Product | Acetyl xylan esterase |
|---|
| Protein accession | YP_001817376 |
|---|
| Protein GI | 182412310 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3458] Acetyl esterase (deacetylase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.144902 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAT TCCTTGGCTC CGCCCGCCTG CTCTGCGCCA CCAGTCTCGC GCTGCTGGTA
CTGCTCACCG CCAGTCACGC CGCCCCGGCA GTGCTGCAGC CGCTCAAGGC GTCCGGTATT
TACGACCTCG GCGAGAAGGC GGGCTGGACC GTGACAATGC CGGCGGACGC CACGCTCCCG
ACCGGCGGCT ACAACTACAC GATTAAGAAA AACGACACGA CGACACTCGC CTCGGGCCCG
CTCGACCCAA GCGGCGGTCC GGTCGAGATC GCGGTCACGT TGAACGAGCC CGCGATGCTT
TTCGCCGAAG TCACCTCGGC CGCGGGCGAA GCCGATCGCG CCATCGCGGG CGCCGCGGTC
GCGCCGACGC AGTTGCAGCC GGTGGTGGCG CGTCCGGCGG ATTTCGATGC GTTCTGGACG
TGGATGATCC AGGTGTTGCA CCGGATCCCG GTCGAACCCG CGCTGAAAAA CGGCGAGAGC
GGCCGCGACG GCGTCGAGTA CGCGACGATT CGGATGAACA ACATCGACGG CTCGCACGTC
TACGGGCAGC TGGCGAAGCC TGCGCGCGAA GGGAAGTTTC CCGCCCTGCT GATGCTCCAG
TGGGCCGGCG GACCTTATCC GCTGCAAAAG CCCTGGGTGG TCGATCACGC CGCCGAAGGC
TGGCTGGCGT TGAACATCGA GCCGCACGAC GTCCCCGGCG ACATGCCCAA GGAGTTTTAC
GACGCGCTGC CGGCGATGAT CAAAAGCTAC AACACGATCT ACAACGACAG CCGCGATCGG
AACTATTTTC TCCGGATGTA TCTCGGCGCC TATCGCGCCG TCGATTACCT CGCCGGTCGC
CCGGATTGGG ACGGTCGCAC TCTCCTCGTC ACCGGCACCA GCATGGGAGG ACAGCAAAGC
CTCGCGGTCG CCGGCCTGCA TCCCCAAATC ACGCACGTGA TCGTACACGT GCCCGCCGGC
GCCGATGCGA ACGCGGCGCT GCACGGCCGC TCCGAAGGTT ATCCGAACTG GGACCGCACC
AACCCGAAGG TGATGGAAAC CGCGCGTTAT TTCGACACGG TCAACTTCGC CCCGCACATC
AAGGCGCGCA GCCTCGTCTC CCTGGGTTTT CTCGATCGCG TGTGTCCGCC CGCCGGCATC
TGGACCGCCT TCAATTTGAT CGCCGGGCCC AAGGAAGTCG TGCCGCTCGT CGAGGCCGCG
CACAACCACC AATCGACGCC GGAGCAGCAG CGCGCCTACT ACGATCGCTC GAAGGCATGG
ATGGACGCGC TGGTCAAAGG CCAGGAGCCT TGA
|
|---|
| Protein sequence | MKRFLGSARL LCATSLALLV LLTASHAAPA VLQPLKASGI YDLGEKAGWT VTMPADATLP
TGGYNYTIKK NDTTTLASGP LDPSGGPVEI AVTLNEPAML FAEVTSAAGE ADRAIAGAAV
APTQLQPVVA RPADFDAFWT WMIQVLHRIP VEPALKNGES GRDGVEYATI RMNNIDGSHV
YGQLAKPARE GKFPALLMLQ WAGGPYPLQK PWVVDHAAEG WLALNIEPHD VPGDMPKEFY
DALPAMIKSY NTIYNDSRDR NYFLRMYLGA YRAVDYLAGR PDWDGRTLLV TGTSMGGQQS
LAVAGLHPQI THVIVHVPAG ADANAALHGR SEGYPNWDRT NPKVMETARY FDTVNFAPHI
KARSLVSLGF LDRVCPPAGI WTAFNLIAGP KEVVPLVEAA HNHQSTPEQQ RAYYDRSKAW
MDALVKGQEP
|
|---|
| |