| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0025 |
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| Symbol | |
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| ID | 6206232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 29348 |
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| End bp | 30808 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689646 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001816917 |
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| Protein GI | 182411851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.245374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.08145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTTC GCCTCCGGCT CCTCCTGCCT CTTCTTGCTG TGCTGCTCGC CGCGACCGGT
GCTCGCGCCG AGATCAAGCT CACGCTCGAT GAGGCCATCC GGCTCGCGCT GGAGAAAAAT
CCACAGATCA AGGTGGACGC CTACGATCGC CCGATCGCGC GCGCCGATTG GTTGGCCGAG
CTTGGCCGCT TCGATCCGGC GCTGACCTTC CGCCGCAGCT ATTCCGAGAG CAACACGCCG
TCCTACGGAC CCGCGACGTT GAGCGATCTT TACCAGAGCG ACGAATACAG CCTCGGACTT
GAAGGCACCA CGCCCTGGGG CCTGAGCTAC CGGATCGGCG GCACGGCCAG CAACGAGCGC
CGCGCAATCG ATCCCGACGC GTTCGCCACG TTCGGCGGCA TTCAGGTCAC GCAGCCCTTG
CTCCGCGGCT TCGGTTTTGG CGCGAATCTT CGCGGCGTGC GGATCGCGCG CGCCAACCGC
GGGATCGCCG ATTGGACGTT CCGCCAGAGC GCCATCGACA CCGTCACCGC GGTGATCGGA
GCCTACAGCG ACGTGTCGTA TGCGCAGAAC CTCCTGCGGA TCACCCGCCG CTCACGCGAA
TTGTCCTCCG GGCTGGTCGC GGAAAACGAG CGTCGGTTCA AGGTCGGCAG CATGTCGGAG
AACGACGTCG TCCAGGCTCG GGCCCGCAGC GCCGCGCGCG ACCAGGCGAT CCTTTACGCC
GAGCAGGCCG TGCGCGACAG CGTGAACCGG CTCCGCCAGC TGATCGGCGA GACCGAGTTT
CCCATCGAGC CGGAGAACAT CGTCGTCGAG CCGCCGGAGA TCGTCGACGA ACCCACCATC
TCGCTGCAGG AGGACCTGAA GATCGCGTTC GAAAAGCGGC CCGACTATCA GGCGGCGCGG
CTCGGGGTGG ACATTTACCG CGTCAATCAC GTCTACGCGC GCAACCAGTT GCTGCCGCAG
CTGGATTTCG TGGGCAGCTA CGGTTACCGC GGATTGGATA CCGACTTTGG TGTCAGCCGT
CGGATGGTGC GCGATCGGGA AAATCGCGCC TACTCGGCCG GCGTCGTGGT CAGCGTGCCG
CTCACGTTCA CCGAAGGCCG CGGGCGATTG CGCTCGGCCC GGCTGAAGCT GCGGCAGAGC
GAAGCCGATC TCGATCGGCT CGAACAGGAC ATCGCCGTCT CGGTCGCCAG CGCGGCCGGC
CAGATCGACA CGGCGCGCCG TCGCGTCGCC GCCAATCGCG CCGCGTACGA GCTCGCGAAG
CAGGCGCTCG ACGACGAGCT GAAGAAGCTC CGCGCCGGCA CCAGCAGCAC GTTCTTCGTG
CTCAATATCC AGGAGCAACT CGCCGCGGTG GAGAGCAATC TCTACCAGTC GCTCGCCGAT
CAGCGCCGGG CACACGCGAA CTACGATCGC GCGATTGGCC GCACGCTCGA CGTGCACCAC
GTCACGCTCG CGAAGGAATA A
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| Protein sequence | MTFRLRLLLP LLAVLLAATG ARAEIKLTLD EAIRLALEKN PQIKVDAYDR PIARADWLAE
LGRFDPALTF RRSYSESNTP SYGPATLSDL YQSDEYSLGL EGTTPWGLSY RIGGTASNER
RAIDPDAFAT FGGIQVTQPL LRGFGFGANL RGVRIARANR GIADWTFRQS AIDTVTAVIG
AYSDVSYAQN LLRITRRSRE LSSGLVAENE RRFKVGSMSE NDVVQARARS AARDQAILYA
EQAVRDSVNR LRQLIGETEF PIEPENIVVE PPEIVDEPTI SLQEDLKIAF EKRPDYQAAR
LGVDIYRVNH VYARNQLLPQ LDFVGSYGYR GLDTDFGVSR RMVRDRENRA YSAGVVVSVP
LTFTEGRGRL RSARLKLRQS EADLDRLEQD IAVSVASAAG QIDTARRRVA ANRAAYELAK
QALDDELKKL RAGTSSTFFV LNIQEQLAAV ESNLYQSLAD QRRAHANYDR AIGRTLDVHH
VTLAKE
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