Gene OSTLU_17340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17340 
SymbolMRPL4 
ID5004366 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp336638 
End bp337396 
Gene Length759 bp 
Protein Length224 aa 
Translation table 
GC content67% 
IMG OID640419787 
ProductPutative mitochondrial ribosomal protein L4 
Protein accessionXP_001420312 
Protein GI145351929 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000952824 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0986734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGC GCTGGACGAT CGCGGAGGGA CAGGGGCGGG GGGAGGACGC GGTGGTGCCG 
GTGTACTCGT TCGACGGCGA AGCGCGAGGA TCGGTGGAGC TTCCGGGGCG GATATTTGAT
CAGCCGTTGC GCGTGGACGT CGCGCACCGC GTGGTGCGGT GGCAACGCGC CAAGGCGAGG
AAGGGTTTGC ACAAGACGAA GTCGCGCGGG GAGGTCGCGG GGTCGACGCG GAAGGTGAGA
CCGCAAAAAG GGTCGGGGCG CGCGCGCGTG GGGAACCTGA AGGCGCCGCA GATGCGAGGC
GGGGGGACGG CGCACGGACC GGTGGTGCGG TCGCACGCGC ACGCGCTGCC GAAAAAAGTG
CGGCGAATGG GGCTCAAGGT GGCGCTCAGC GCCAAGGCGG CGGAGGGGAA GCTCATCGTT
GTCGATTCAT TCGCTGGGAT GGAGCCGAAA ACGCGCGCGA TGAAGGCGAC GCTCGAGCGG
TTGACGGGCG ACCTCGGCTT GGCCGCCGGC GGCGAGTTTC ACTCGACGCT CATCATCGAC
GGCGAATTCG AGGAAATGGC GGAGAGCGTC GTGGACGCCG AGGACCAGTT CGGGCCGAGC
GAGCTCGTGC GCATGAGCGC TCGAAATTTG CCGCACGTGG AGGTGCTGCC GCAAATCGGC
GCCAACGTGT ATAGCATTTT GCGTCGCCGG ACGCTCATCG TCACCAAAAG CGGGCTCGAG
CAGCTCATCG CGCGATTAGA CGCGCCGATC AAGCGATGA
 
Protein sequence
MRVRWTIAEG QGRGEDAVVP VYSFDGEARG SVELPGRIFD QPLRVDVAHR VVRWQRAKAR 
KGLHKTKSRG EVAGSTRKVR PQKGSGRARV GNLKAPQMRG GGTAHGPVVR SHAHALPKKV
RRMGLKVALS AKAAEGKLIV VDSFAGMEPK TRAMKATLER LTGDLGLAAG GDELVRMSAR
NLPHVEVLPQ IGANVYSILR RRTLIVTKSG LEQLIARLDA PIKR