Gene Nwi_3077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3077 
Symbol 
ID3675402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3340794 
End bp3342272 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content66% 
IMG OID637714642 
ProductSignal transduction histidine kinase 
Protein accessionYP_319677 
Protein GI75677256 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCAGG CGATCGAACA GCTCCGGATT CGCGCCGCGC GTCTGTCGTT GCGCGGCCGG 
CTCGGCCTGT CCGGCAAGCT CCTGCTACTC ACGATCCCGC TGGTCATGAT CGCTGAAGTC
CTGATCTACG TCCCGTCGAT CGCGAACTTC CGGGTAAACC GGCTCAATGA TCGGCTGGCG
GCCGCGAACA CAGCCGCCCT GGTGCTCGAC GCGGCCCCCT CGGGCATGGT GCCCGAGTCG
CTCGCGCGGC AGATCCTCGG CAGCATCGGC GCGCGGGCGG TCGCCATCAA GATGGGTCAG
CAGCGGCGAC TGCTCGCCAG CGCGGATCTG CCGGCGTCGA TCGACCATGA CATCGACATG
CGCACCATGA CGCCGTGGTC AGCCATTGTC GGCTCATTCG AAACCATGCT GGAAAGCGGC
AACCAGGCGA TCCGCATCAT CGGGCCCGGG CCACGCGGTG CCCAGTTCAT CGAAGTCGTC
ACCGACGAGG AGCCGCTACG CCAATCGATG TACCGCTTTT CACGCAACCT GTTGCTGGTC
TCGCTGGCGA TAGCTGTTCT GACGGCCGCA TTGGTTTATC TGGCGCTGCA CTACCTGTTC
GTCCGCCCGA TGCGGCGACT GACCGCCAAT CTCGTGGGTT TCCACCAGAA CCCCGAAAGC
CCCGCGCGAA TCATCGTGCC GTCGCAGCGC GGCGACGAGA TCGGCGTCGC CGAGCGTGAA
CTCTCCGACA TGCAGCGCGA CCTGGTGTCC ATGTTGCATC AGAAGAGCCG GCTGGCCGCG
CTCGGTCTCG CCGTTTCGAA GATCAATCAC GACCTTCGCA ATCTATTGGC GTCCTCCCAG
CTGCTTTCCG ACCAGCTGGC CAGCGTACCC GATCCACGGG TGCAGCGGTT CGCGCCGAAG
CTGATGCGCT CGCTGGAGCG CGCCATCGCG TTCTGCCAGT CAACGCTGTC TTATGGACGG
GCGCAGGAGG CTACCCCCGA CCGGCGGCTG ATGGCGATCG AGCCCATCGT CAACGAGGTG
CGGGAATCAG CCGGGCTGAC GCCGGAGGGG TCCATAACCT GGATCGATGC GATCGAGCGC
GGCCTTACGA TCGACGCGGA TCCGGATCAG CTTTTCCGTA TTCTGCTCAA TCTGGTGCGC
AACGCCGCAC AGGCTTTGGA AACCCAGCCG CGAAACGAAG CGGCGACCCG GCAAATCCGG
GTCGCCGGCC GCCGCGAAGG CGCGGTGGCG ATCATCGAGG TTTCCGACAC CGGACCGGGC
GTTCCGGAAC AGGCGCGCAG CCACCTGTTC GAGGCGTTCC AGAGCTCAGG ACGCCCAGGC
GGCAGCGGCC TCGGCCTTGC GATCGCGGCG GAACTGGTGC GTGCGCATGG CGGCGATATC
CACCTGGTGG AAGGCACCAT AGGCGCCACG TTCCGGATTA CGATCCCGGA CCGTCCCGTG
GAGTTGCAAA CCATCCGTAA CGAACGCGCG CGGGCCTGA
 
Protein sequence
MSQAIEQLRI RAARLSLRGR LGLSGKLLLL TIPLVMIAEV LIYVPSIANF RVNRLNDRLA 
AANTAALVLD AAPSGMVPES LARQILGSIG ARAVAIKMGQ QRRLLASADL PASIDHDIDM
RTMTPWSAIV GSFETMLESG NQAIRIIGPG PRGAQFIEVV TDEEPLRQSM YRFSRNLLLV
SLAIAVLTAA LVYLALHYLF VRPMRRLTAN LVGFHQNPES PARIIVPSQR GDEIGVAERE
LSDMQRDLVS MLHQKSRLAA LGLAVSKINH DLRNLLASSQ LLSDQLASVP DPRVQRFAPK
LMRSLERAIA FCQSTLSYGR AQEATPDRRL MAIEPIVNEV RESAGLTPEG SITWIDAIER
GLTIDADPDQ LFRILLNLVR NAAQALETQP RNEAATRQIR VAGRREGAVA IIEVSDTGPG
VPEQARSHLF EAFQSSGRPG GSGLGLAIAA ELVRAHGGDI HLVEGTIGAT FRITIPDRPV
ELQTIRNERA RA