| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1863 |
|---|
| Symbol | |
|---|
| ID | 3674512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 2044863 |
|---|
| End bp | 2045561 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637713424 |
|---|
| Product | ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_318475 |
|---|
| Protein GI | 75676054 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0577867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0321889 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAGG GGAAGAAGGA AACGCCGACT GTCTATCTTC ACGACATCAA GCGGGAGTAT
ACGCAGGGTG AAACACGGCT GACGATTCTG GACAGCACCA AGCTTGCCTT GTGGGCGGGG
CAGTCCGTCG CACTGGTGGC TCCCTCGGGA TCGGGTAAGT CAACCCTGCT GCATATTGCC
GGGCTGCTTG AAAGCCCCGA TGCGGGAGAG GTCTACATCG GAGGAATCGC GACGTCCGGT
CTTTCGGATG TGGAGCGCAC GCAGATAAGG CGCACCGATA TCGGGTTCGT CTACCAGTCG
CACCGCCTTC TTCCGGAATT CACAGCGCTC GAAAACGTCA TGCTGCCGCA GATGATCCGT
GGACTTAAGC GCGCGGAGAC GGTCAAGCGC GCACAAGAAA TTCTAGCCTA TCTCGGCCTT
GAGGATCGGG TCACACATCG TCCGGCCGAA CTGTCCGGCG GTGAGCAGCA GCGGGTTGCG
ATCGCGCGAG CCGTCGCCAA TGCACCGCGG GTGCTGCTTG CCGACGAACC GACCGGCAAC
CTGGATCCCC AAACGGCGGA TCATGTGTTC AATGCGCTGA TGCAGCTTGT GAAGGCGACG
CGGGTGTCAA TGCTGATCGC GACGCATAAC ATGGAGCTCG CAGACCGGAT GGATCGGCGA
GTATCACTTG AGAACGGTCA CGTCGTCGAA CTCGACTGA
|
|---|
| Protein sequence | MEQGKKETPT VYLHDIKREY TQGETRLTIL DSTKLALWAG QSVALVAPSG SGKSTLLHIA
GLLESPDAGE VYIGGIATSG LSDVERTQIR RTDIGFVYQS HRLLPEFTAL ENVMLPQMIR
GLKRAETVKR AQEILAYLGL EDRVTHRPAE LSGGEQQRVA IARAVANAPR VLLADEPTGN
LDPQTADHVF NALMQLVKAT RVSMLIATHN MELADRMDRR VSLENGHVVE LD
|
|---|
| |