Gene Nwi_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1201 
Symbol 
ID3675660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1311903 
End bp1313285 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content64% 
IMG OID637712751 
Productcation efflux protein 
Protein accessionYP_317815 
Protein GI75675394 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCC TCGCCGCCAG ATCGAAAACG AAGGTCGCCG CGATCTCCAT AATCGCCAGC 
GCCAGCATGG CGGCGATCAA ACTCGTGGTC GGCGTTGCGA TTGGCAGTCT GGCGCTGATT
TCCGAAGCGC TGCACAGTTC GATCGATCTG GTCGCCACCA TCGTCACCTG GATCGTGGTC
CGGATTTCCG ACCGTCCCGC CGACGCCGAA CATCACTACG GCCACGGCAA GATTGAAAGC
CTCTCGGCCC TCGGCATCAT CGCCATGTTG TATGTGCTTG CTGGCGGCAT CGTGGTGCAG
GCTTATAGCC ACCTCCGCGA AGGCGCGGCA CCGCCGACGC TTTCCGCTAT CCCGTTCATC
GTCCTGGTCA CCGATATTAT CGTCAATGCC TGGCGCGCCC GGGCGCTGCA CCGGGCCGCG
CTCGACACCC GCAGTCAGGC GCTGGAGGCC GACGCCCTGC ACTTTGCCTC CGATGTCCTT
GGATCGGTCG CCGTCATCAT CGGGCTGACC CTGTCCGGAC TGGGCTATGC GTGGGGCGAC
GCGGCTGCGG CGATCGGCGT CGCCATCCTG ATTTCCCTGT TGGGTTTGCG GCTTGGACGC
GCCACCGTCG AAACCCTCCT GGACCGAGCG CCGGAAGGCG CCGCCGAAAG GGCCGGAGCC
GCGATCAGGG CGTTGCCGGA TGTCGTCGAT CTCAAGAGGC TGAGGGTACG AATGGTCGGT
CCCCGGCATT TCGTCGACGT CATCGTCGAA GTCCCCCGAA CCTATCCGAT CGACCGCATC
GACGCCATCA AGCAGCAGGC CCAGGACGCA GTGTCCGCGG CTCTCGGCGA TGCTGATCTG
ACGTTCACTG CGATACCTGT CGCTCGCGAC AACGAAAGCG TCCGCGAACG CATCATGGTG
ATAGCCCGCA ATTTGGGCCT CGCCATTCAT CACGTCACGG TGCACGACCT TGGAGCAAAG
CTGACGGTCA GCATCGACCT CGAGGTCGAC GGCGAAATGG CGCTGGTGGA TGCCCATGCC
ATCGCGCATC GGCTGGAGCA CGATATCCGT CATGAATTCG GTGCAGACGT CGAAGTGGAT
ACTCACATCG AGCCGCTGGA GCCGGAGCTT CCGCTCGGGA CCGATGCCGC CCCCGGGCGC
ATCCACGCCA TCCGGACCGC CCTGTCCGGT TTCGCCGCCG GCGGAGCGAT CCATGACATT
CACAACGTAC GCGTCAGAGA CACCGAAGCC GGCGAGATCG TCAACTTCCA CTGCCGGGCC
GCGCCGTCGA TGAGCGTCGC CAGAGTGCAT GAAAGTGTCG ACGAGATCGA ACGGGCTTTG
CGCCGCGCGT TCCCAAGCGT TAAGCGCGTC ATCAGCCACG CGGAGCCGCC GCGCGAAAGC
TGA
 
Protein sequence
MSRLAARSKT KVAAISIIAS ASMAAIKLVV GVAIGSLALI SEALHSSIDL VATIVTWIVV 
RISDRPADAE HHYGHGKIES LSALGIIAML YVLAGGIVVQ AYSHLREGAA PPTLSAIPFI
VLVTDIIVNA WRARALHRAA LDTRSQALEA DALHFASDVL GSVAVIIGLT LSGLGYAWGD
AAAAIGVAIL ISLLGLRLGR ATVETLLDRA PEGAAERAGA AIRALPDVVD LKRLRVRMVG
PRHFVDVIVE VPRTYPIDRI DAIKQQAQDA VSAALGDADL TFTAIPVARD NESVRERIMV
IARNLGLAIH HVTVHDLGAK LTVSIDLEVD GEMALVDAHA IAHRLEHDIR HEFGADVEVD
THIEPLEPEL PLGTDAAPGR IHAIRTALSG FAAGGAIHDI HNVRVRDTEA GEIVNFHCRA
APSMSVARVH ESVDEIERAL RRAFPSVKRV ISHAEPPRES