| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0994 |
|---|
| Symbol | |
|---|
| ID | 6316851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 1058972 |
|---|
| End bp | 1059787 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642643366 |
|---|
| Product | histone deacetylase superfamily |
|---|
| Protein accession | YP_001917166 |
|---|
| Protein GI | 188585621 |
|---|
| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.815956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.564868 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTG TATTTCATGA AGATTTTTTC AAAACCTATA GTTTTGATCC AGCGGCATCC
AAAGGAAGAT TAGATCATGC TGCAGCATTG TTAACAAACC ACTACCCCGT AGTCACTCCT
TATCTAGCCT CAGAAAAACA AATCAAAATA ATTCATACTG ATTCTCACGT CCAAGAGATT
CAAAACTCAA GTCAGATATA TCACATGGCA CGCCTGGCAG CAGGTTCAGC CATCAAAGCT
GCTGATCTCG CCTATTCTGG TACAGCAGCT TTCTCCCTGG CCAGGCCTCC AGGCCATCAT
GCAGGTCCGT CTACATATTG GGGTTTTTGT TATTTTAATA ATATAGCCAT CGCAGTAAAA
CAGTTGATAT TAGAAGAAAA AATCAATTCC GCTGTAATCG TAGATTTTGA CCTTCATCTA
GGTGATGGCA CTATTGATTC CTTTGCTGAT ACTCCCGAAG TTCATTATTA TCATCTTGAA
AACGGAATTG ATTTAATTGG TCTCAACAAT GGAAATAAGG ACTTTAGAAA TCACCCGGTA
ACTCAATTAA GAGAATACTT AAAGAAATTC TATAATATAC CAGAAGATAC ACCTGATATC
CTTGCTGTGT CTGCAGGCTT TGATCGACAC ATACATGATT GGGGTGGCAG CTTGGATACT
AAAGAGTACC AGGAAATAGG TGAAGAGTTG GGAAAATTTG CCAAAGAGCA ATGTCAAGGT
AAGATTTTTT CCGTACTGGA AGGTGGTTAT AATCCCGAAT CTTTGGGAGA AAGTGCCTTG
GCCTTTTGTC AGGGAATTGA AAAAGGAGTT AACTAG
|
|---|
| Protein sequence | MKIVFHEDFF KTYSFDPAAS KGRLDHAAAL LTNHYPVVTP YLASEKQIKI IHTDSHVQEI
QNSSQIYHMA RLAAGSAIKA ADLAYSGTAA FSLARPPGHH AGPSTYWGFC YFNNIAIAVK
QLILEEKINS AVIVDFDLHL GDGTIDSFAD TPEVHYYHLE NGIDLIGLNN GNKDFRNHPV
TQLREYLKKF YNIPEDTPDI LAVSAGFDRH IHDWGGSLDT KEYQEIGEEL GKFAKEQCQG
KIFSVLEGGY NPESLGESAL AFCQGIEKGV N
|
|---|
| |