| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4121 |
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| Symbol | |
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| ID | 4596635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4352098 |
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| End bp | 4353780 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639778727 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_925305 |
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| Protein GI | 119718340 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCCCG ACACCCCCGC CGCGACTGCG CTCGAGCTCC GCTGGGGACC GACGAGCACG
TGGCACGTCG GTGCCCACCT CCAGCGGCAG GCGAGCGAGC GACCGGACGC GCCCTACCTC
GCGATCGGGG ACTCCCCGCT GCACACGTTC GGGCAGGTCG CCACCGACGC CGAGCGCGTC
GCAGCCCGGC TCTGGTCCCT CGGCCTGCGC GCCGGCGACC CGGTCCTGTT CTTCCTGCCG
ACGTCCTGGG CGGCGGTGCA CGGGTGGCTC GGCGCCAAGC TCCTCGGTCT GGTCGACGTC
CCGCTCAACC ACGCCTACCG CGGCGAGTCA CTCACCCACG CCGTCCGGCT GTCGGGCGCG
CGGGTGATCG TGGTCGCCCT GGAGCTGCTC CCCGAGCTCA CCCGCATCCT GGACCGGCTC
GACGACCTCG TGGTCGTCGT CGCCGACGGC GCGGCGCCGG CGGACTCCGG CGCGCTCTCC
CTCGACGAGC TGCCGACTCC GACGGACTGG GAGGCCGCCA GCCCCGCCCA CAGCGCGCTG
TCGACAGTGC TGCTCACGTC GGGGACGACC GGGCCGGCCA AGGGCGTGAT GATGACCAAC
GCCCAGACCC ACACGATCGC GCGCGAGTGC GCCGAAGGCC TGCGGATGGG CCCGGAGGAC
GTCTTCTACT GCTTCCACCC GCTCTTCCAC ATGGCCGGGC GGTTCGGCGC GCTGTACGCC
GCGCTCGTCA TGGGCGGCCG GGTGACCCTG GACGTCGGAT TCACACCCGA GTCATGGATC
GACCGGATCC GGGAGTGCGG CGCGACCGTC ACGATCGCCC ACGGACCGAT GATCGAGATG
GTGCACGCGA CCCCCCGTCG CCCCGACGAT GCGACGACGG CACTGCGCGC CGTGCTCGCC
GCACCGCTAC CGGCGGCGAT CGGCGTGGAC TTCGAGGAGC GCTTCGGCGT GGTCGCCCTG
GAGACCTGGG GCATGACCGA GGTCACCGCC TGCTGCTGGC GTCCGTACGA CGCGCCGCTG
CGGCTCGGCG CAGCCGGTCG GCCGCTCGAC GACCTGGTGG AGATCACCGT CGTCGACCCG
GACACCGACG AGCCGCTCCC GGCGGGCCGG GTCGGGGAGA TCACGGTCGT GCCGCGGCAT
CCGTGGCTGA TCATGCAGGG CTACCTCGGG ATGCCCGAGG CGACCGTGCA GGCGTGGCGC
AACCTCCGCT TCCACAGCGG CGACGCCGGC TACCTCGACG AGGACGGCTG GCTGCACTTC
GTCGACCGCC TCGGTGACCG GATCCGCCGC AAGGCCGAGA ACATCTCCTC CTACGAGATC
GAGGTCGCGG CGAGCAGCCA CCCCGGGGTC CTCGAGGTGG CGGCCGTCGG TGTGCCGATC
AGCCCGTCCG ACGACGAGAT CAAGCTGTGC GTCTCCACCG AGGCGGGCTT CAACGCCGAG
GCGCTCTTCC GGCACCTGGT CGCCGAGCTC CCCCACCACA TGGTCCCGCG GTACGTGGAG
CGGCTCGAGG CGCTGCCACG CACACCGACC AACAAGATCC GCAAGCGCGA GCTCCGCGAG
CGCGGGGTCA CCCCGGACAC CTGGGACTAC AAGGCGGCAG GCCTGTCCAT CCGAGCCCTC
CGCACGACCA CGGATCACGA CCTCGCCCGC CACCCAGCAC CCGCGAAAGG CACCCCAGCA
TGA
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| Protein sequence | MIPDTPAATA LELRWGPTST WHVGAHLQRQ ASERPDAPYL AIGDSPLHTF GQVATDAERV
AARLWSLGLR AGDPVLFFLP TSWAAVHGWL GAKLLGLVDV PLNHAYRGES LTHAVRLSGA
RVIVVALELL PELTRILDRL DDLVVVVADG AAPADSGALS LDELPTPTDW EAASPAHSAL
STVLLTSGTT GPAKGVMMTN AQTHTIAREC AEGLRMGPED VFYCFHPLFH MAGRFGALYA
ALVMGGRVTL DVGFTPESWI DRIRECGATV TIAHGPMIEM VHATPRRPDD ATTALRAVLA
APLPAAIGVD FEERFGVVAL ETWGMTEVTA CCWRPYDAPL RLGAAGRPLD DLVEITVVDP
DTDEPLPAGR VGEITVVPRH PWLIMQGYLG MPEATVQAWR NLRFHSGDAG YLDEDGWLHF
VDRLGDRIRR KAENISSYEI EVAASSHPGV LEVAAVGVPI SPSDDEIKLC VSTEAGFNAE
ALFRHLVAEL PHHMVPRYVE RLEALPRTPT NKIRKRELRE RGVTPDTWDY KAAGLSIRAL
RTTTDHDLAR HPAPAKGTPA
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