| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3000 |
|---|
| Symbol | |
|---|
| ID | 4595638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 3194319 |
|---|
| End bp | 3195473 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639777605 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_924189 |
|---|
| Protein GI | 119717224 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0763479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGATGA CCGACGAGCT TGCCGGACGC CACGTGGCGT TCTTCAGCTG GCGGGACACC
CGGAACCCCG AGGGCGGCGG CGCGGAGCGG TACCTCGAGA AGATGGCCGC CGGCCTGGCC
GCTCGAGGTG CCCGGGTCAC GATCTTCTGC GTCGCGTACG CCGGCGCCGC TCCCGACGAG
ACCATCGACG GCGTGAGGTT CGTGCGCCGC GGCTCGAAGC TCTCGGTCTA CCTCCTCGGG
ATGTGGGCGC TGCTGCGCCG GCAGCTCGGC CGGGTCGACG TGGTGGTCGA CATCCAGAAC
GGGCTGCCGT TCTTCACGCC GCTCGTGACC CGCAAGCCGG TCGTCGTGCT GGTCCACCAC
GTGCACCGCG AGCAGTGGCC GGTCGTCTAC CCCGGCTTGA CCGGCAGCGT CGGCTGGTGG
ATCGAGAGCC GGGTCGCGCC CCGGCTGTAC CGCCGCCAGC AGTACGTCGT GGTCTCCCGC
GCGACCCGCG CCGAGCTCCG GGAGCTCGGC GTGACCGGGC CACGGATCGC GGTCGTGCAC
AACGGAACGG ATCCGGTCGT CCGGGTCCAG GCCCGCAAGT CGGCCCATCC CTCCATCTGC
GTGGTCGGCC GGCTGGTCCC CCACAAGCAG GTGGAGCACG CGATCGACGC GGTCGCCACG
CTGGTGGAGG AGTTCCCGGA CCTCCGACTG CGCGTGGTCG GCAGTGGCTG GTGGGAGGGC
GAGCTGCGCG CCTACGCCGC CGAGCAGGTG GCCCGCGGCT CCGTGGTCTT CGAGGGTCAT
GTGTCCGAGG TCCGCAAGCA GGAGATCTAC GAGGAGTCCT GGCTGATGGC GCTCCCCTCG
CTGAAGGAGG GGTGGGGCCT GGTCGTCGGC GAGGCTGCCG CGCACCGAAC GCCCACCATC
GCCTACGCCG ACGCGGGCGG CACCCGCGAG TCGATCGTCG ACGGTGTCTC CGGTGTCCTG
GTCGGGAACC CCGGCGAGCT GACGGCGGCG CTCGGCCGGC TGCTGCGCGA CGACGAGGGC
CGGGCCCGGC TGGCGGAGGG CGCCGTGCAG CACAGCGCCG GCTACACCTG GGAACACGCG
CAGGCAGCGT TCGCGCACGT CGTGACGAGC GCCCTGCGCG GTGACCTGGT CAACGACCAG
GACGCCACCG ACTAG
|
|---|
| Protein sequence | MPMTDELAGR HVAFFSWRDT RNPEGGGAER YLEKMAAGLA ARGARVTIFC VAYAGAAPDE
TIDGVRFVRR GSKLSVYLLG MWALLRRQLG RVDVVVDIQN GLPFFTPLVT RKPVVVLVHH
VHREQWPVVY PGLTGSVGWW IESRVAPRLY RRQQYVVVSR ATRAELRELG VTGPRIAVVH
NGTDPVVRVQ ARKSAHPSIC VVGRLVPHKQ VEHAIDAVAT LVEEFPDLRL RVVGSGWWEG
ELRAYAAEQV ARGSVVFEGH VSEVRKQEIY EESWLMALPS LKEGWGLVVG EAAAHRTPTI
AYADAGGTRE SIVDGVSGVL VGNPGELTAA LGRLLRDDEG RARLAEGAVQ HSAGYTWEHA
QAAFAHVVTS ALRGDLVNDQ DATD
|
|---|
| |