12 homologs were found in PanDaTox collection
for query gene Noca_2675 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_2675  pentapeptide repeat-containing protein  100 
 
 
250 aa  490  9.999999999999999e-139  Nocardioides sp. JS614  Bacteria  normal  0.33412  n/a   
 
 
-
 
NC_013947  Snas_5585  pentapeptide repeat protein  62.45 
 
 
258 aa  293  2e-78  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3680  pentapeptide repeat protein  45.69 
 
 
266 aa  225  6e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0611357  normal  0.412611 
 
 
-
 
NC_013235  Namu_3823  pentapeptide repeat protein  45.7 
 
 
254 aa  192  3e-48  Nakamurella multipartita DSM 44233  Bacteria  normal  0.199719  normal  0.0347073 
 
 
-
 
NC_013530  Xcel_0945  pentapeptide repeat protein  50.61 
 
 
264 aa  187  1e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2076  pentapeptide repeat-containing protein  46.56 
 
 
266 aa  181  7e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0171382  normal  0.301394 
 
 
-
 
NC_012669  Bcav_3732  pentapeptide repeat-containing protein  43.32 
 
 
257 aa  176  3e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.612833  normal  0.0137169 
 
 
-
 
NC_011886  Achl_1041  pentapeptide repeat-containing protein  42.86 
 
 
265 aa  171  9e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014158  Tpau_4160  pentapeptide repeat-containing protein  41.22 
 
 
266 aa  136  3.0000000000000003e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3749  glyoxalase/bleomycin resistance protein/dioxygenase  42.19 
 
 
214 aa  52.4  0.000007  Caulobacter sp. K31  Bacteria  normal  0.127226  normal 
 
 
-
 
NC_009654  Mmwyl1_2777  pentapeptide repeat-containing protein  36.21 
 
 
124 aa  46.2  0.0005  Marinomonas sp. MWYL1  Bacteria  normal  0.13799  normal 
 
 
-
 
NC_011366  Rleg2_6057  pentapeptide repeat protein  31.51 
 
 
126 aa  42.4  0.007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.965316  normal 
 
 
-
 
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