Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2376 |
Symbol | |
ID | 4599476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2532004 |
End bp | 2533134 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639776979 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_923568 |
Protein GI | 119716603 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAGGA TCCAGGGGGC GCGGCTCGCG TCCCTCGTTG CAGTAGGAGC GCTCGCCTTC GGGTCGCTCG CCGCGTGCGG CAGCGACTCC GACGGCGGCG ACACCGGCAG TGAGAGCACC AACGGCACCA GCGAGTCGTC CGCACCGGAG GTCACCGGGA AGGTCGGCGT GATCCTTCCG GACTCGAAGA CCTCGGTCCG CTGGGAGACG CAGGACCGGC CGAACCTCGA GGCCGCCTTC AAGGCAGCGG GCCTGGAGTC GATCATCCAG AACGCCGAGG GCTCGCCGGA CACGTTCGGT CAGCTCTGTG ACCAGATGAT CACCGAGGGC GTCCAGGTCC TCATCGAGAC CGACCTCGAC CCGGACTCGG GCAAGGCCTG CATCGACAAG GCCAAGAACG CGGGCATCGC CGTCATCGAC TACGACCGTC TCACCCTGGG CGGCGGCGCG GACTACTACG TGTCGTTCGA CAACGTGAAG GTCGGCGCGC TGCAGGGTCA GGGCCTCATC GACGCCCTCC AGGCCAAGGG CGAGAAGAGC GGCAACATCG CCTTCATCAA CGGCGCCGCG ACCGACAACA ACGCCACGCT GTTCAAGCAG GGCTACGAGC AGGTCATCAA GGACGACGGC AGCTACACGG TCGTCGGCGA CCAGACCGGT GAATGGGACC CGGACACCGC CGGCAAGGTC TTCGACCAGT TCTACGCCGC GCACCCCGAC CTGGTCGGGC TCGTCACCGC CAACGACGGG ATGGCCGGTG GCGTCATCGC CCGTGAGAAG GCCGCGGGCG TCGAGGGCAA GATCCTGGTG ACCGGCCAGG ACGCGACCGC CGAGGGTCTC GCCAACGTGC TGCTGGGCTA CCAGGCCGGC ACCGTCTTCA AGGACACCTC GATCGAGGCC AAGGCCGCTG CCGACCTGGC GATCGCGATC ATCAAGGGCG AGGACCCGTC GACGATCGCG ACCGGCTCCG TCAACGACTC GGTGCTCGGT GTCGACGTGC CGTCGGTGCT CGCCACCCCG GTCTGGATCA CCGCGGACAC GGTCAAGGAC GTGGTCGCCG CCGGCCAGGC GAACGCCGCC GACATCTGCA AGGGTATCGA GGACCTCTGC AAGAAGTACG GAGTCGCGTG A
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Protein sequence | MVRIQGARLA SLVAVGALAF GSLAACGSDS DGGDTGSEST NGTSESSAPE VTGKVGVILP DSKTSVRWET QDRPNLEAAF KAAGLESIIQ NAEGSPDTFG QLCDQMITEG VQVLIETDLD PDSGKACIDK AKNAGIAVID YDRLTLGGGA DYYVSFDNVK VGALQGQGLI DALQAKGEKS GNIAFINGAA TDNNATLFKQ GYEQVIKDDG SYTVVGDQTG EWDPDTAGKV FDQFYAAHPD LVGLVTANDG MAGGVIAREK AAGVEGKILV TGQDATAEGL ANVLLGYQAG TVFKDTSIEA KAAADLAIAI IKGEDPSTIA TGSVNDSVLG VDVPSVLATP VWITADTVKD VVAAGQANAA DICKGIEDLC KKYGVA
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