Gene Noca_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1848 
Symbol 
ID4597168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1972353 
End bp1973489 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content70% 
IMG OID639776447 
ProductFAD dependent oxidoreductase 
Protein accessionYP_923046 
Protein GI119716081 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.287144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAGA ACAGTGTCGG GACCGTCATC ATCGGCGGAG GAATCGGCGG CGTCGCGCTC 
GCCTACTACC TCGCCGAGCT CGGTGAGGCC GACATCACCG TCGTCGAGGG CCGCGAGCTC
GCGAGCGGCT GCACCGGTGG TTCGCTCGGC GGGGTCCGGC AGCAGTTCAG CACGCCCAAC
GAGGTCGAGT TGGCGCTGCG GGGTCGCACG TTCTGGCAGA CCTTCGAGGA GACCTTCGAC
TACCCGTGCG CCTACCACCA GGACGGCTAC CTGATGCTGA CCGGGCGTCA GGAGATCTTC
GAAAAGCTCG GTGAGGCCGC CGAGGTGCAG CGCGCGGCGG GGGCTACGAA CGTCGAGATG
GTCGCGGCCG CGGACCTCAC TGGCATCGTC CCCTGGCTCT CGCCCGAGGG GCTGGTCGGT
GGCTGCTGGA CGCCGGACGA CGGTCGCGTG AATCCGACCG ACGGCGTCTA CGGCCTGGCC
GCCGCTGCAC GCAAGCTGGG GGTGAAGTTC CTCCAGCACA CCCGGGTCGC CAAGATCGAG
AAGGCCAAGG GCGGCTGGAC ACTGCACACG CCGACGCCGA TCACCGCGCG TCGCGTGATC
GTCGTCGCCG GGCTTGGCTC GCCGGACCTG ATGCGGCCGT TCGGCCTGGA TCTCCCGATC
ACGCCAATGA TGGTGCACTA CGCCTTCACG ACCCCGGTGA TCTCCGACCA GGCGCTGCCG
ATGACCATCG ACCTCGACAC CGGCTTCTGC GTCGAGCGCG AGCAGGACGC CGCGGTGCTC
ACGATCCTGG AGTCGTCGTA CGCCGAGGGC TACGGCGTGG ACGACATGCT CGCCGAGTTC
GCCGAGGCCG CCGCCATCCG GGCCCCGATC TTCACCGAGG TGTCCATCCG CTCGACGATC
AGTGCTTCCG CGGACGCGAC CGGGGGCGAC GGCCACCCGT TCATCGGCGA GGTCGAGCCG
GGCCTGTGGA CCATGACCGG GTTCGACGGC CACGGCACCA TGCAGGGCCC GGCGATCGCC
AAGTTCACCG CGAACCTGAT CGCCGGCATC CCGGACCCGG TGCTGGACCC GGCGATCTTC
GACCCGCACC GCGGGCTGAC CGAGACCCAG GAGTGGCTGC GGGCGGCCCG GAAGTGA
 
Protein sequence
MSENSVGTVI IGGGIGGVAL AYYLAELGEA DITVVEGREL ASGCTGGSLG GVRQQFSTPN 
EVELALRGRT FWQTFEETFD YPCAYHQDGY LMLTGRQEIF EKLGEAAEVQ RAAGATNVEM
VAAADLTGIV PWLSPEGLVG GCWTPDDGRV NPTDGVYGLA AAARKLGVKF LQHTRVAKIE
KAKGGWTLHT PTPITARRVI VVAGLGSPDL MRPFGLDLPI TPMMVHYAFT TPVISDQALP
MTIDLDTGFC VEREQDAAVL TILESSYAEG YGVDDMLAEF AEAAAIRAPI FTEVSIRSTI
SASADATGGD GHPFIGEVEP GLWTMTGFDG HGTMQGPAIA KFTANLIAGI PDPVLDPAIF
DPHRGLTETQ EWLRAARK