Gene Noca_1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1418 
Symbol 
ID4597325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1502324 
End bp1503154 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content66% 
IMG OID639776016 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_922619 
Protein GI119715654 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCG ACCGAGCGCT CGCGCGCTGG CTGCTCCTGA GCTTCCTGAT CCTGGTGCTG 
GCGGTATCGA CCTTCCCGTT CGCGTTCGCG TTCTCGACCG CGCTCCGGCC GCGTGCGGAG
CTGTTCCACT ACCCGCCGAC CTGGCTCCCC GACACCTGGT CGTGGCACAA CTTCGTCGAC
GTGTGGAGTG CGGTGCCGTT GGCGCGCTAC GTCCGGAACA GCCTCGTCGT CTCACTCGGC
GCGACCGCGC TCAACGTGAC GTTGGCCGTG CCCGCGGCCT ACGCCCTTGC CCGGCTGGAC
TTCCCCGGCA AGACGCTGTT CCGCCAGCTC CTGCTCGTGA CCCAGATGTT CTCGCCCGTC
GTGCTGGTCA TCGGGCTCTT CCGGTTCATG AGCCGGCTCC AGCTCGTGGA CACCAGCAGC
TCGCTCATCA TCACCTACGC CGCCCTCAGC CTGGCCTTCT CCGTGTGGTT CCTGGCGGGC
TACTTCGAGT CGGTGCCGGT CGAGATCGAG GAAGCGGCGA TGATCGACGG ATGTAGCCGG
GTCACCGCCC TGGTGCGCGT CGTGCTCCCC ATGTCCGCGC CGGGTCTGGT CGCTGCCCTC
GTCTTCGCGT TCATCTGGTC CTGGAACGAG TTCATGATCG CGCTCACCTT CATCTCCACA
CCCGACAAGC GGACCCTGCC GCTGGGCATC TACTCCTTCC TCGGGCAGTA CTCCGTCGAG
TGGCACTACC TGATGGCAGC CGCACTCATC GCCGGGATCC CGGTCCTGGT GCTGTTCCTC
CTGATCGAGA AGCACTTGGT CAAGGGCCTC ACGGCCGGGG CCGTCAAGTG A
 
Protein sequence
MTRDRALARW LLLSFLILVL AVSTFPFAFA FSTALRPRAE LFHYPPTWLP DTWSWHNFVD 
VWSAVPLARY VRNSLVVSLG ATALNVTLAV PAAYALARLD FPGKTLFRQL LLVTQMFSPV
VLVIGLFRFM SRLQLVDTSS SLIITYAALS LAFSVWFLAG YFESVPVEIE EAAMIDGCSR
VTALVRVVLP MSAPGLVAAL VFAFIWSWNE FMIALTFIST PDKRTLPLGI YSFLGQYSVE
WHYLMAAALI AGIPVLVLFL LIEKHLVKGL TAGAVK