Gene Noca_1119 details

Gene Information

• Locus tag: Noca_1119
• ID: 4599372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 1185426
• End bp: 1187435
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 79%
• IMG OID: 639775715
• Product: peptidase M23B
• Protein accession: YP_922322
• Protein GI: 119715357
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0739] Membrane proteins related to metalloendopeptidases

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTCAC GCCCCCTGCT GCGGATCGCG GCCTGCGTCG TGACGGTCGG GACCCTCGGG 
TCCACGCTCC TGGCGAGCCC CGCCCCCGCG GCGGCCGCGA CGCCCACGAG CAGCACGGCC 
CAGCAGTCGG TCGACGACGC CCGGGCCACC TACGAGCAGC TCCGCGCCGA GGTCGCGGCG 
CTCAGCGCCC AGCACGACCG GCTGGCTGAA TCGGCCGCCG GCGCCGAGGC CGAGGCCGCG 
CGGCTGCGCG CCGAGGTGGC CGACGACGAC CACGGCTTCC TGCAGGCCGT CGGCGACCTG 
GTCCGGCCCG GCCCCTCCGA CCTGGACCGC GCCACCGAGG CCGCCGACGA CGCGGCGTTC 
GCGCGCGACC TGGTCGACCT GGTCGACACC GCGCTCGCCG AGCGGATCGC CGACACCGAG 
CGCGCCCGGG TCGCCTGGGA GCGCGCCGAG CGCCGCCAGG CGCGGGTCGA GGCGGCCTGG 
ACCGCGGGCC AGGCCGCGGA GGCCGCGATC CGGCGGGCCC AGTTCCAGCC GGCGTACGAG 
GTCACCGACC CCGCCCAGGA CCGGCGCAAC CAGCGGGCCC TGCGCGCCTG GGAGCGCTAC 
CTCCGGCTGC TGGCCGCCAA CGCCGTCGTC CCGCCCCGCC TCGCGGACCT CGCCCGCGGG 
CCGATCGAGC CGCTCGAGCC GCTGCGCGAC TCGCGCAACG ACGTCTCGCC CGGTGTCGCG 
GTCCTCGACC CGCCGGGCTC CCCGGCGATC ACCGTGCTGT CCGCCGAGGC GATCCGCGCC 
GTCTCGGACG CGTTCCACCG GGTCGGGCTC CCGGACGTGC CCGGCGCGAT CGAGCCCACG 
GCGTACGCCT GCGGCGGCCT GGTCGCGAAC GCCTGGGGGG CGTCCGCGAC CGTGGCGCCG 
CTGCCCGCCG ACGTCCCCGG CCAGTGGGAC GCCCTGCGCA CCGTGCCCGG CGCGTCCGTG 
CAGGTGGGCG ACGTCGTCGT CCTCGGCAGC CGCCGCGACG GCCTCGGCAC CAGCGGTGTG 
TACGTCGGCC GCGACCAGGT CGTCGCCGCC GACCCCACCA CCGGCGTCGC GGCGGTGCGG 
CCGCTCACCG AGCCCGTGCT GGGCGTGCGC CGCGCCGGCC TCGAGAGCGG CGGCCACCAC 
GCCGCGCCCC CGGCCGGCGG CAGCTGCGGA GCGACCAGCC TGGCGCCGGA CACCGTCACG 
GGCGGGCCGC TCGGCCTGCC GGTCGCGCCG GGCAGCTACC AGCTGACCGC CGGGTTCGGC 
ACCGCCGGAC CGCTCTGGTC CGACGGCGTC CACACCGGCC TGGACTTCGC CGCGCCGGTC 
GGCACCCCGG TGGTCGCCGC CGGCGCCGGC ACCGTCACCG TGCAACACCC GGCCTGGGCC 
GGGAGCCTGG TCCGGATCGA CCACGGCGGC GGGGTCGAGA CGTGGTACGC CCACCTCTCG 
CGCGTCGACG TGACCTCCGG CCAGCTGGTC CGCGCCGGCG ACCCGGTCGG CCTGGTCGGC 
GCCCGCGGCA ACGCCAGCGG CCCGCACCTG CACTTCGAGG TGCGGCTCGA CGGCGCCGCC 
TACGACCCGG CGCTCGTCCT CGACCTGCCC GAGCGGCCGC GCCCGTCGTA CCCCAACGGC 
GAGATGCCGG CCGACGCGCT CTGCCCCGCG ACCGCCGACG GCGCGCAGCT GCTGCGCTGC 
GACGCGGCGG TCGCGTTCCG GCTGCTCGCG GCGGCGTACG CCGACGACCT CGGCGCCTCG 
CTGTGCATCA CCGACTCCTA CCGCTCGCGC GCCGGGCAGG AGCGGGTGTC CGCGACGAAG 
CCCGGCCTGG CGGCCTCCCC CGGCACCTCC GTGCACGGGC TCGGGCTCGC GGTCGACCTG 
TGCGGCGGCG TCGAGCGGTT CGGCAGCACC GAGAACGACT GGCTGCTCGG GCACGGCCCC 
GGCTACGGCT GGGTGCACCC GGGCTGGGCC GCCGCCGGCG GCAGCCGCCC GGAGCCGTGG 
CACTTCGAGT ACGCCGGCGG GGTGGCCTGA 

 

Protein sequence

MTSRPLLRIA ACVVTVGTLG STLLASPAPA AAATPTSSTA QQSVDDARAT YEQLRAEVAA 
LSAQHDRLAE SAAGAEAEAA RLRAEVADDD HGFLQAVGDL VRPGPSDLDR ATEAADDAAF 
ARDLVDLVDT ALAERIADTE RARVAWERAE RRQARVEAAW TAGQAAEAAI RRAQFQPAYE 
VTDPAQDRRN QRALRAWERY LRLLAANAVV PPRLADLARG PIEPLEPLRD SRNDVSPGVA 
VLDPPGSPAI TVLSAEAIRA VSDAFHRVGL PDVPGAIEPT AYACGGLVAN AWGASATVAP 
LPADVPGQWD ALRTVPGASV QVGDVVVLGS RRDGLGTSGV YVGRDQVVAA DPTTGVAAVR 
PLTEPVLGVR RAGLESGGHH AAPPAGGSCG ATSLAPDTVT GGPLGLPVAP GSYQLTAGFG 
TAGPLWSDGV HTGLDFAAPV GTPVVAAGAG TVTVQHPAWA GSLVRIDHGG GVETWYAHLS 
RVDVTSGQLV RAGDPVGLVG ARGNASGPHL HFEVRLDGAA YDPALVLDLP ERPRPSYPNG 
EMPADALCPA TADGAQLLRC DAAVAFRLLA AAYADDLGAS LCITDSYRSR AGQERVSATK 
PGLAASPGTS VHGLGLAVDL CGGVERFGST ENDWLLGHGP GYGWVHPGWA AAGGSRPEPW 
HFEYAGGVA