Gene Noc_2957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2957 
Symbol 
ID3707339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3342561 
End bp3344093 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content53% 
IMG OID637739432 
Productferredoxin-dependent glutamate synthase 
Protein accessionYP_344930 
Protein GI77166405 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAG CAAAGATAGC GGATCGTATT CCGAAGCAGC TGAATTCGGA GCCGGGCGAA 
TACTACTGGT GTGCTTGTGG GAGATCGAAG AAACAACCGT TTTGTGATGG CTCGCATGTC
GGGACCGGTA TCAAACCGGT TGCGTTCATG GTTGAGGAAG GGGCCAGCGA ATGGCTGTGC
ATGTGCAAAC AAACAGGTAA TGCTCCGTAT TGTGATGGGA CGCACAAAAC CTTGCCGCCG
GATGAAACGG AACTGGAAAT ACCCGATAGG AGACCAAAAG CGGAGTCTCC GGCTCCAGTC
AATACGCCAG AAGAGCCGAC GGTGGAGTTT ATCCACTCAT TGGCTAAACA CGGCCTAAAA
CACTACGGAC AGCAAGGCAA AATGGATGCG ATGGGCGTGC CGCGCTCCCG TCTGCCGGGC
TGGGAGGATA TACAAATCCT TACAGCACAA CTTGCTCGTA TGCCTCTGCA AGAGGATGCT
CCCGTGGATA CAGGGCTCAC CATCGGCCCG AATGCAAAAA GGCCATTGCA TCTTGCGCTA
CCCCTTTTTG TATCAGACAT GAGTTTCGGC GCCCTATCGG AAGAGGCCAA AACTGCGTTG
GCGCGTGGTG CGGAGTTGGC CGGGACCGGT ATTGCTTCTG GCGAGGGTGG TATGCTGCCC
GCAGAACAAC AAGCCAATTC ACGCTACATG TTTGAGCTCG CATCAGCTAA GTTTGGCTAT
AGCGAGTCCC TTTTGACACG TATTCAAGCG TTTCATTTCA AGGCTGGTCA GGCCGCAAAA
ACTGGAACCG GTGGGCATCT GCCGGGGGTC AAGGTCAGCG AGGACATTGC CTCAGTGCGC
GGTATACCCG TCGGGAAAGA TGCGGTGTCC CCATCCATTT TCCCGAATCT CAAGGCACCG
CATGATTTCA AGGAATTTGC CGACCATGTG CGTGAGGTGT CTGGCGGGAT TCCGATCGGT
TTTAAGATGT CGGCCCAGCA CATTGAAAAA GACATCGATT TTGCCCTGGA GGCTTCTGCT
GATTACATTA TCTTAGATGG AAGAGGCGGC GGTACGGGTG CGGCCCCACT TCTGTTTCGT
GACAACATAG CCGTTCCCAC GATTCCGGCG CTCGCACGTG CTCGTCGACA CTTGCATGCC
GTAGGTCGTG AGGATGTTAC CTTAATCATT ACGGGTGGAT TGCGTACACC TGATGATTTC
ATCAAAGCGC TGTGTTTAGG GGCAGACGGC ATTGCCGTAG CCAATAGCGC AATACAAGCC
ATTGGTTGCG TGGGTGCCCG AATATGCCAT ACAAATAACT GCCCGACGGG CATTGCCACA
CAGAAAGAGG AGCTGCGCGC ACGGCTCAAT GTTGATGTCG CTGCTGAACG TCTTGCCCGA
TTCTTTAGTG CCTCAACCGA ACTCATGAAG GTTATGGCCC GAGCGTGTGG CCATACCAAG
CTGAACGACT TCAATACAGA TGACATTACT TCGTGGAAAA AGCCCATAGC GGAACTTGCT
GGTATTCGAT ATGCTGGTCT CGCAGCCGAG TAA
 
Protein sequence
MAKAKIADRI PKQLNSEPGE YYWCACGRSK KQPFCDGSHV GTGIKPVAFM VEEGASEWLC 
MCKQTGNAPY CDGTHKTLPP DETELEIPDR RPKAESPAPV NTPEEPTVEF IHSLAKHGLK
HYGQQGKMDA MGVPRSRLPG WEDIQILTAQ LARMPLQEDA PVDTGLTIGP NAKRPLHLAL
PLFVSDMSFG ALSEEAKTAL ARGAELAGTG IASGEGGMLP AEQQANSRYM FELASAKFGY
SESLLTRIQA FHFKAGQAAK TGTGGHLPGV KVSEDIASVR GIPVGKDAVS PSIFPNLKAP
HDFKEFADHV REVSGGIPIG FKMSAQHIEK DIDFALEASA DYIILDGRGG GTGAAPLLFR
DNIAVPTIPA LARARRHLHA VGREDVTLII TGGLRTPDDF IKALCLGADG IAVANSAIQA
IGCVGARICH TNNCPTGIAT QKEELRARLN VDVAAERLAR FFSASTELMK VMARACGHTK
LNDFNTDDIT SWKKPIAELA GIRYAGLAAE