Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2533 |
Symbol | |
ID | 3704689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2885728 |
End bp | 2887071 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637739012 |
Product | multi anti extrusion protein MatE |
Protein accession | YP_344516 |
Protein GI | 77165991 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000103349 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGC ACAAGCGCCA AGCGCCGCAG CCGCCGCTTC CTCCCCTTGG CCTGAAGCCG CTCCTGGCGC TTGCTATTCC CAGCGCTGTT TTCACTTTGC TCACCAACGG TTTTCGGATC GTTGATCAAT ATTTTATTCA AGATGTGTCC GTCGAAGCGC AAGCCGCCAT TGGCTCGTCC GTCTTCGTGG TTATTTTTAT CTATGCCACT TTTGAATTGC TGGCAGCAGG GGCGGGGCCC CTTATCGCCC GGGCAACTGG CGCCCACGAT CCGATAGCCC GCCGGGCGCT GCTTGGCGAA GCTCTCTTCG GCGCTCTCCT CCTGACCATG CTGCTAATGG TCATTGGCAC CCTGGGAGCA CCGCTGTTTA CCCGCGCCTT GGGTCTTGAA GGCCAAGCGG CCAGTGAGTC CAATCGTTAT TTGTGCACCC TTTTTTTAAC CGTGCTGCCC TTGGTGCTGA CGCCCTTAAT CGATCAGGCG TTTATCAATA TGGGTTCGGC CCGGCCGCCG TTAATTCTCC ATGCCCTCTC CCTGAGCCTG AATATTATTT TGACCCCCCT CCTCATCCAT AGCGCGGGGC TTGGCATTGT AGGAGCTGCC TTGGCCTCTA ATCTCGCCCG TGGTATTAGC GTTGGCTTGG GACTCCTGCT GCTCAAAAGG ATAACAGGAT TAACCCTAAA AGACCTCAAG CCCCGCGGGC AACTGCGCCG GATTTTACGG ATCGGCGCCC CCATGGCTTT AGGAACGGCC TTTTTCGCCA TGGTCTATTG GGCACTGCTG AAAACCTCCG TTTCACCCCT GGGGGCCCAT GCCAACGCCG CCCTGGGAAT TGGATTTTCC GCCCTTGAAG GATGCACCTG GCCACTCTTC CACGGACTCT CTCTTGGCGC CGCTTCTCTT GCTGGCCGCT ACCTGGGAGC CCAGCGGCCC GATTTGGCCC GCCAAACCTT TTACATGGCC CTACCCTTCG CGACCCTTCT GGGCCTCGCG GCATCCCTAA CATTTTTCTT TGCTGGCGAA GCGCTCACTG GCCTTTTTAC CGATGACCGG GCTGTCCATC AGGCGGCAAC GGAATATGCG GTAATTCTCG CCGCCTCTCA GCTTTTTCTC GCCTGGGAAG CCTTAAGTAC CGGCATTTTG GCCGGCGCCG GTGATACCCG GACGGTATTT TGGTACAGCA CCCCTTTCAA CCTCCTCCGG ATTCCCCTCG CCTGGTTACT CGCTTTCCCC CTGGGTTTTG GCGCCCCTGG GATTTGGTGG GCGATTAATC TCACCACCTA TGCCAAAGCG ATTTGCAAGG GGTGGGCGGT ATGGCGAGGA CGCTGGGCCA CTATCGAGCC TTGA
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Protein sequence | MAKHKRQAPQ PPLPPLGLKP LLALAIPSAV FTLLTNGFRI VDQYFIQDVS VEAQAAIGSS VFVVIFIYAT FELLAAGAGP LIARATGAHD PIARRALLGE ALFGALLLTM LLMVIGTLGA PLFTRALGLE GQAASESNRY LCTLFLTVLP LVLTPLIDQA FINMGSARPP LILHALSLSL NIILTPLLIH SAGLGIVGAA LASNLARGIS VGLGLLLLKR ITGLTLKDLK PRGQLRRILR IGAPMALGTA FFAMVYWALL KTSVSPLGAH ANAALGIGFS ALEGCTWPLF HGLSLGAASL AGRYLGAQRP DLARQTFYMA LPFATLLGLA ASLTFFFAGE ALTGLFTDDR AVHQAATEYA VILAASQLFL AWEALSTGIL AGAGDTRTVF WYSTPFNLLR IPLAWLLAFP LGFGAPGIWW AINLTTYAKA ICKGWAVWRG RWATIEP
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