Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2273 |
Symbol | |
ID | 3705065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2619976 |
End bp | 2620524 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637738752 |
Product | type IV pilus assembly protein PilX |
Protein accession | YP_344261 |
Protein GI | 77165736 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4726] Tfp pilus assembly protein PilX |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAA TTTCTATCAT TTCTTCCTCA CAACGGGGCG CCACCCTCAT CATCAGCCTC TTGATGCTGC TGGTCATGAC CTTGATTGGG GTCACAGCTA CCCAAACCAC CGCCTTAGAG GAAAAAATGG CAGGCAACCT AGGTGACCAG AATCTGGCCT TCCAAGCTGC GGAAGCAGCC TTGCGGGCTG GCGAAGGCTG GCTAGGGCAG CAAACGGATG AACCTGATCC ACAACCCCTG GGTAGCTGCG GCACCCCCCC CTGCGATCTG GTATGGCAGC TCAATCTCCT CAATGGGGGC GATTTTGTGG ACATTAATTG GTGGAAAACC GCGGGCGAGG CCCGTATTTA CGGCAATGCC GCCCTCGCCA AAATAAAAAC CGCGCCCAAA CACTTTGTCG AATACCATTC CTTTATCAGA AACGGCCTTA CCCTGGGCAA GCAAAGCGAT GAAGTGGGAC GGCATGTCTA CCGGGTGACC GCCCGGGGAA CCGGGGGAAC AGACCAGGCC CAGGCCATTC TCCAGACCAC CTATACCCGC CGTTTCTAA
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Protein sequence | MKPISIISSS QRGATLIISL LMLLVMTLIG VTATQTTALE EKMAGNLGDQ NLAFQAAEAA LRAGEGWLGQ QTDEPDPQPL GSCGTPPCDL VWQLNLLNGG DFVDINWWKT AGEARIYGNA ALAKIKTAPK HFVEYHSFIR NGLTLGKQSD EVGRHVYRVT ARGTGGTDQA QAILQTTYTR RF
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