Gene Noc_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1486 
Symbol 
ID3705977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1646195 
End bp1646941 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content45% 
IMG OID637737973 
ProductABC-type phosphate/phosphonate transport system periplasmic component 
Protein accessionYP_343502 
Protein GI77164977 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000364049 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTATA ATTTTACCGT TAGTCCAGAT TTTACCCCGG ATCATTTATC CGGCTGGTAT 
ATTTTTAATA CCTGGCTACA GAAAGCCCTG GGTGAAGCTG TCCACCTGGA AATGTATAAT
GATTTTCAAA CCCAGCGCGA TGCCATCGAT GCAGGGAAAG TAGATTTAAT TTATGCCAAT
CCCTACGATA CCTCAATGCT GGTGAGAGAA AAAGGGTTCA CCGCTTTAGT TAAGCCAAAA
GATGAAGCGG ACGAAGCCAC CGTCGCTGTT CATACCCGTA GTCCCGCAAA AACCGTGGAA
GATTTGGAAG CCGGAGTGAA AGTGGCTATT ACCAATGATC CGGATATCCA CATGGTAGGT
CTCATCATGC TTGAGCCGGC CGATTTGAAT TCGGCCAATA TACAACTGAA CATCCGAGAT
AATTACCTCA TGGTTGCAAA GGATTTGCTG CGGGGCGAAA GTGATGTAGG AATTTTCTTG
GCCGAAGCCT TCGATAACTT ATCTTCCATG GTTAAAAGCC AGCTTCGAAT TCTGGTTAGC
AGCCAGATTC GGCTTATTCA TCACTCTCTG ATGCTCGGCC CCGCTTTGGC GGATAAACAA
GAAAAGCTAT TAGGAGCCCT CATGGGCATG ATGGAAAATG AGAAAGGTCA AGGAGTTTTA
AAAAGTCTTG GTTTCAGCGG CTGGGAAGCG GTCAATCAAG AAAATACAGA ATTCATGATT
GATCTCATGG ATACTTTGGT GGTTTGA
 
Protein sequence
MSYNFTVSPD FTPDHLSGWY IFNTWLQKAL GEAVHLEMYN DFQTQRDAID AGKVDLIYAN 
PYDTSMLVRE KGFTALVKPK DEADEATVAV HTRSPAKTVE DLEAGVKVAI TNDPDIHMVG
LIMLEPADLN SANIQLNIRD NYLMVAKDLL RGESDVGIFL AEAFDNLSSM VKSQLRILVS
SQIRLIHHSL MLGPALADKQ EKLLGALMGM MENEKGQGVL KSLGFSGWEA VNQENTEFMI
DLMDTLVV