| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1020 |
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| Symbol | |
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| ID | 3707281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1130615 |
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| End bp | 1131799 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637737525 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_343058 |
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| Protein GI | 77164533 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGATG AAAAGGGTCA TTTTGGTCCT TATGGTGGCC GCTTTGTAGC GGAAACCCTG
ATGGAGCCTA TTGAGGAACT CCGCCAGGCC TATGCACGCT ACCGTGATGA TCCAGATTTC
CAGGCCGAGC TAGAAGCCGA CCTTGCCCAT TATGTGGGGC GGCCGACGCC CTTGTATTTT
GCCAAACGCT GGAGCGAGCA GTTAGGGGGT GCCCGGATCT TTTTGAAGCG GGAAGATCTA
AGTCATACCG GCGCCCATAA AATCAACAAT ACCGTGGGGC AAGCCCTGCT GGCAAAGCGG
ATGGGGAAGA CTCGTTTGAT CGCGGAAACG GGAGCGGGTC AGCATGGCGT AGCTACCGCC
ACGGTAGCCG CCCGTTTAGG GTTGGAATGC GTGGTCTACA TGGGGGCTGA GGATATAGAA
CGACAAGCCC CTAATGTTTA CCGGATGCGC CTGTTAGGGG CAGAAGTAGT GCCGGTGACT
TCCGGGTCTA GAACCTTGAA GGATGCCTTG AATGAAGCCA TGCGGGATTG GGTGACTCAT
GTGGATAACA CCTTTTATGT GATTGGCACC GTGGCGGGGC CTCATCCCTA TCCCGTGATG
GTGCGGGATT TCCAGGCGGT GATTGGGCGG GAGGCCCGGA CCCAGATTCT AGAGCAGCTA
GGCGCGCTTC CCCAGGCTTT GGTGGCTTGC GTGGGGGGAG GGTCCAACGC CATCGGCTTA
TTTCATTCTT TTTGCAAGGA TGAGCAGGTC GCACTCTATG GTGTGGAAGC GGCGGGGCTA
GGATTGGAGA GCGGACAACA TGCCGCTTCC CTCTGTGCGG GCAAACCGGG TGTTCTTCAT
GGTAACCGGA CCTATTTGGT GGAAAATAGC CATGGTCAAA TTATAGACAC CCATTCCATT
TCAGCGGGTC TTGATTATCC TGGGGTAGGC CCCGAGCATG CTTGGCTGAA GGATACTGGG
CGGGCGACCT ATGTGGCGAT TAGCGATGAG GAGGCCCTGG GGGCTTTTCA TGCCTTGACC
CGTATTGAAG GCATTATTCC CGCTTTGGAA AGCAGTCATG CCTTGGCCTA CGCTACGCAA
TTGGCCCCCA CTTTAGCTCC AGAGCAGGGG ATTATCGTGA ATCTTTCAGG GCGCGGGGAT
AAAGATATCA ATACGGTAGC CAAAATTGAG GGGATTTCCC TGTGA
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| Protein sequence | MPDEKGHFGP YGGRFVAETL MEPIEELRQA YARYRDDPDF QAELEADLAH YVGRPTPLYF
AKRWSEQLGG ARIFLKREDL SHTGAHKINN TVGQALLAKR MGKTRLIAET GAGQHGVATA
TVAARLGLEC VVYMGAEDIE RQAPNVYRMR LLGAEVVPVT SGSRTLKDAL NEAMRDWVTH
VDNTFYVIGT VAGPHPYPVM VRDFQAVIGR EARTQILEQL GALPQALVAC VGGGSNAIGL
FHSFCKDEQV ALYGVEAAGL GLESGQHAAS LCAGKPGVLH GNRTYLVENS HGQIIDTHSI
SAGLDYPGVG PEHAWLKDTG RATYVAISDE EALGAFHALT RIEGIIPALE SSHALAYATQ
LAPTLAPEQG IIVNLSGRGD KDINTVAKIE GISL
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