Gene Noc_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0230 
Symbol 
ID3706285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp254265 
End bp255284 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content55% 
IMG OID637736746 
Producthypothetical protein 
Protein accessionYP_342290 
Protein GI77163765 
COG category[S] Function unknown 
COG ID[COG3055] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATCTA ATAAAACCTA CCTAAGCTTA CTTTTCTTGC TAAGCCTAAG CCTATTGTTT 
CTAACCTATT CCGCCTCGGC GCAGTGGCAA CAACTACATC CCATGCCCAC CCACCGTTCG
GAAATGGCGG CAGCCTATCT GGATGGAAAA ATATATGTAC CAGGAGGATT AGGCGGCCAG
CACCAGTTTG AAGTATATGA TGTTACCACT GATAGCTGGG AACAACTGGC ACCGCTGCCA
GCCCCTCGCC ATCACCTCAT GGCCACAGCC CATCAGGGGA AAATCTATGT TTTTGGGGGC
GGCGATCAAG ATTGGTCTCC AACGGTAACC GCTTGGGTTT ACGATCCCCC CAGCAATCAG
TGGCAAACCT TAACGCCCTT GCCCGAACCC CGCTATGCGG GAGATGCCGT CTCAATGGGT
GATTTTATTT ACGTTGTAGG CGGCAAAGGC CCAAGCGGAA GATTGCTCCG CTATGACCCA
CAGCAAGATT CCTGGGATTT CCTAAAGGGG ATGCACCAGC GCAGGGAGCA TATCCGCAGC
GTGGTTTTTG AAGACAGGAT CGTCGTCCTC GGCGGCCGCT ATCAGGGCGC TGGCGAACTG
GGCTCAGTGG AAATCTATGA TCCCGCAACC GATACTTGGC GGGAAGGCCC CTCCTTGAAT
ACCGCCCGGG GTGGCCATGG CGCAGCGGTT TATCAAGGAA AAATCATGGT TTTCGGAGGC
GAAATCATCA TGACCGGACG AACAACCCTG GCCAGTTCAG AAATCTTGGA AAAGCTATCC
GGAAAATGGC AACCTGGTCC TCCCTTGCCC ATGGCGCTCC ACGGGATGCC CGCTATCAGC
ACCGGCTCCC ATTTGTATAT TCTGGGGGGC TCAGAACAGG CGGCGGCCAG CATCAACCGT
GGCCGAGTCT ATCGCCTGTT GGAAACGCCA GGCCCTCCAC CAGCCCTTAC CCTCGGCTTA
TTCCTTACGA CTCTGCCTCC GGAGCCCATT AGCAGCTTTC AACTTGCTCC AGCACCGTGA
 
Protein sequence
MRSNKTYLSL LFLLSLSLLF LTYSASAQWQ QLHPMPTHRS EMAAAYLDGK IYVPGGLGGQ 
HQFEVYDVTT DSWEQLAPLP APRHHLMATA HQGKIYVFGG GDQDWSPTVT AWVYDPPSNQ
WQTLTPLPEP RYAGDAVSMG DFIYVVGGKG PSGRLLRYDP QQDSWDFLKG MHQRREHIRS
VVFEDRIVVL GGRYQGAGEL GSVEIYDPAT DTWREGPSLN TARGGHGAAV YQGKIMVFGG
EIIMTGRTTL ASSEILEKLS GKWQPGPPLP MALHGMPAIS TGSHLYILGG SEQAAASINR
GRVYRLLETP GPPPALTLGL FLTTLPPEPI SSFQLAPAP