| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1354 |
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| Symbol | |
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| ID | 5774758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1239281 |
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| End bp | 1240615 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641316999 |
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| Product | multicopper oxidase type 3 |
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| Protein accession | YP_001582688 |
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| Protein GI | 161528862 |
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| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases
[COG3794] Plastocyanin |
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| TIGRFAM ID | [TIGR02376] nitrite reductase, copper-containing |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.111259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAAAGC CAAATACAAT CTATATTGTT GCAGGAATCA TAATTGGATT TAGCATAGCA
TTTGCAATAC TCTTACAGTC CCCTGAGATT CAAACAACTG TTGCAGACTC GTCTGACACT
TTTCCAAAAT TCAAAAACCC AAATCCGCAA ACACTGTCTT ATACTTTGAT TGCACAAGAT
GCCGAAATTG AGGTGTCTCC TGGAGTCAGG GCCAAGGTTT GGACGTACAA TGGAACGGTT
CCTGCACCAA CGCTTAGATT CTCTGAGGGA GATGACGTTA CCGTAAAATT TGTAAATGAT
ACTCCATATG CACATACCAT TCATTTTCAT GGAACCCATG ATTCTGCAAA TGACGGAGTC
TTTCCAATGA TAATGCCTGG AGAGGAATAC ACGTATCACT TTGTAGCAGA AGAAGCAGGA
CTGTTCATGT ATCACTGTCA TGCATTTCCT ACGTCCGAGC ATGTTAGAAT GGGCATGTTT
GGCACCATGA TAATTGATCC TGCAATACGT CCAATGGATC CTGCACGTGA ATACTTTTTT
ACTTTAAGCG AATTTGATCC AAATAACGCA TTGGAGCATT TTACTGAATT TTATCCAATT
AATGGATATG CCGGTCAGTA CATGGATAAT CCAATACGAG TTGTTTCAGG AGAATTGACC
AGATTTTATG TTGTAGGTAT TGGGGGAGTT TTACAGTCAC CGTTCCATGT TCACAGCACA
ATCATGAAGG TGTACCCGTC AGGAATACTG TGGAATGAGC CATACTATGC ACAGACACAT
CTGATAGGAA ACGGTGACAC TGCAATAATT GAAGCTACAT GGACACAGCC TGGAATGTAC
CTCTTCCATG TACATGGAAT ACAAGAGGAA CGTGGCTCCA TGGCAATGAT TGAAGTGCTT
GAGGATGCAT CATCATTATC AGACGTTCAA AGACCAAGCA ACAACAAGGG AAGCTATTCC
ATGGTAGAGT GGCAAGAAGA CCTAATCAGA ACTTTGGAGC AACCACAGCT AATCTCATAT
GAAAACTTGG GAGAGTCTGC TGCCATATCA TCTGAAAAAG TATCTGCTGA CAAGGTATCA
ATTGTAAAGG ATTCCTGGAA TCCTGAAATC ACAGAGTCAT ATGATCCTAT TGCAATACAA
GTTGACTCTG GTACTACCGT AACGTGGACA AATGATGACT CTGTAGTGCA TACTGTAACT
GACAATGAAA ATTCATTTGA CTCTGGATTC ATACAGGCAG GAAATACATG GAGCTACTCC
TTTGACAATC CAGGAGAGTT TGATTACATC TGTACTTTGC ATCCTTGGAT GAAAGGTACA
ATTAGCGTGA ACTGA
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| Protein sequence | MVKPNTIYIV AGIIIGFSIA FAILLQSPEI QTTVADSSDT FPKFKNPNPQ TLSYTLIAQD
AEIEVSPGVR AKVWTYNGTV PAPTLRFSEG DDVTVKFVND TPYAHTIHFH GTHDSANDGV
FPMIMPGEEY TYHFVAEEAG LFMYHCHAFP TSEHVRMGMF GTMIIDPAIR PMDPAREYFF
TLSEFDPNNA LEHFTEFYPI NGYAGQYMDN PIRVVSGELT RFYVVGIGGV LQSPFHVHST
IMKVYPSGIL WNEPYYAQTH LIGNGDTAII EATWTQPGMY LFHVHGIQEE RGSMAMIEVL
EDASSLSDVQ RPSNNKGSYS MVEWQEDLIR TLEQPQLISY ENLGESAAIS SEKVSADKVS
IVKDSWNPEI TESYDPIAIQ VDSGTTVTWT NDDSVVHTVT DNENSFDSGF IQAGNTWSYS
FDNPGEFDYI CTLHPWMKGT ISVN
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