| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1225 |
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| Symbol | |
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| ID | 5773092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1125183 |
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| End bp | 1126052 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641316869 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001582559 |
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| Protein GI | 161528733 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATAT CCAAACCAAG GATAGTCGTT CTTCTAGTGA TAACTGCAGT TACATCAATG
TATGCTGCAA GCAAGCTTGT TCCAGGTACT CCTGAGCTTG ATTATTGGGC TTATTTGCAC
ATCATTATAG CCGGAGCATT GGCATCAGCT GGTTCTAGTG CTTTGAATCA CTATTATGAC
AAAGATATTG ATCCAAAAAT GGAGAGAACA AGCAAAAGAC CTATTCCTTC TGGAAGAATG
GCTGCATCTC ATGTTTTGAT TTATGGTTTA GCAGTTAGTT GTATTTCTGT TATTTACGGA
TACTTTGCAT TAAATCCAGT TTCTGCATTC TTTATTGCAG TTGGAATATT CTCTTATGTC
ATAATCTATA CTGCTTGGCT TAAACGACTA AACACCTCAA ACATTGTGAT TGGTGGTATT
GCAGGTAGTG CAGCTGCATG GGCTGGTTGG TCCGCAGCTA CTGGAAGCAT GGATCTTTTA
GGATTCTTAG TTGGATTCTT AGTTTTTGTT TGGACTCCAT CACACTTTTG GTGTCTTGCA
ATGAAAATCA AAGATGAATA TGCACAAGCT GAAGTTCCAA TGTTGCCTGT TGTAATTGGA
ATGCAAAAAA CTTCAAAGTA TATTTTAGGA AATACAATAA TTCTTCTTCC TTATTCTTTG
ATACTGTCTT TCATCCCTGA CGGAATGGGA GTTGTGTATA CCATAATTGC AGCAGTGTCA
GGTGGATTAA TGTTGGCATA TCATTACAAA CTAACAAAGA CTCCTACATC TGAATTTGCT
TGGAAGGCAT ACAAAGTTAC TGCGCCTTAT CTTACAATAA TTTTTGTTGC AGTAGCATTA
GATGCAGCAT TTCATATTCC GTTGTTCTAG
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| Protein sequence | MEISKPRIVV LLVITAVTSM YAASKLVPGT PELDYWAYLH IIIAGALASA GSSALNHYYD
KDIDPKMERT SKRPIPSGRM AASHVLIYGL AVSCISVIYG YFALNPVSAF FIAVGIFSYV
IIYTAWLKRL NTSNIVIGGI AGSAAAWAGW SAATGSMDLL GFLVGFLVFV WTPSHFWCLA
MKIKDEYAQA EVPMLPVVIG MQKTSKYILG NTIILLPYSL ILSFIPDGMG VVYTIIAAVS
GGLMLAYHYK LTKTPTSEFA WKAYKVTAPY LTIIFVAVAL DAAFHIPLF
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