| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0682 |
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| Symbol | |
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| ID | 5773734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 621596 |
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| End bp | 623224 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641316318 |
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| Product | triple helix repeat-containing collagen |
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| Protein accession | YP_001582016 |
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| Protein GI | 161528190 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTCTC AATCTAGATT AGAAATCCAA GGTCAGGCAC CATTCAAGCA ATCTGGCGTC
TATGAGGCTC AAATTGCAAT CGTTGGCAGC CGACCTTCTG ATGCACAAAT TAAATCTAAA
CAATTCACAT CTCTTTGGCG TGGAAATTTC CATCTACGAG TTAAAGATGG AGTATTTTCT
GAAACAATTG GTTCTCCTGA AAACCCAATT CCATCATCTG TCTTAGAATT AGAAACAATT
TGGATAGTTG TAACTGATCT GTTTTCATCA CTACATTCTG TATTTGATGT CCCATTATCA
AAACCAAAAT CTTCCCCAAA ACCTCCTGAA TCAAAACCTT CTGAAACTAA ATCAAATCTT
GAAACTCCAA AACAAACACG TTCAACAAAA TCAACTCAAA GCACTCCTGG CGTACGAGGT
AGCCCTGGTG AAAAAGGCGC ACCTGGATTA CAAGGTCCAA CTGGTGACAA AGGTCCACAA
GGTCCTCCCG GCCCAACTGG TCCTCCCGGT GACAAAGGTC CTGACGGTCC ACAAGGTCCT
CCCGGTGACA AAGGTCCAAC TGGTGACAAA GGCCCTGCAG GTGACAAAGG TATTGCTGGA
GATAAAGGAA TTACTGGTGA CAAAGGAATT ACTGGAGATA AAGGTGATAA AGGTGACAAA
GGAATTCCTG GTCCCGTTGG TGATAAAGGT GACAAAGGAG CAACTGGTCC AATCGGAGAA
AAAGGTCCAA CTGGATTAAA AGGCCCAATC GGTGAAAAAG GAGAAAAAGG TCCAACTGGT
CCTCCCGGCG ACAAAGGATT ATCTGGATTA AAAGGTCCTC CCGGTGAAAA AGGAGAAAAA
GGTCCAACTG GTCCTCCCGG CGATAAAGGT TTAACTGGTC CTGTCGGAAC TCCTGGAGAA
AAAGGTCCAA CCGGACAAGC AGGAGTTCAA GGAGAAAAAG GAATTCAAGG TGGTCCTGGT
CCAATCGGAG AAAAAGGTCC AGCAGGTCCA GTTGGTGACA AAGGTCCAAT CGGTCCAGCA
GGTCCTCTTG GCGACAAAGG ATTATCTGGT CCAACCGGAG TTCCTGGTGA CAAAGGTCCA
ATCGGTCCTC CTGGTCCAAT CGGAGAAAAA GGTCCTAAAG GAACTGAAGG TCCAATCGGA
GAAAAAGGTC CACAAGGTCC ACAAGGTCCA GCTGGTGCTA AAGGATTAAC AGGCGTTCCT
GGTCCACAAG GTGAAAAAGG AGAAAAAGGT CCAACAGGTC CGCCCGGAGA AAAAGGATTA
ACAGGTCCAG CAGGTCCACC TGGAGAAATT GGTACAGTTG GTCCACAAGG TTCTCAAGGA
GAACGCGGTC CAACAGGTCC ATCAGGAGAA AAAGGTCCAC AAGGTCCACA AGGAATTCAA
GGTCCGCAAG GAGAACGCGG CCCAACTGGT CCAATCGGTT CTATTGGTGA AGCAGGTCCT
CGTGGAGAAC AAGGCCCATT AGGTCCAGCA GGACCAAGAG GTCCACCCGG TCCACCAGGC
GAAAAAGGTC CATCAGGTGG AATGTCTTCT GAACAAAAAG CATTGTTCAA AGAATTGCTA
GAAATACTAA CTGAGAAAAA TATCATTAGC ACTGAAGAAC AAATCAAACT AATGAGTTAT
CTTTACTAG
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| Protein sequence | MSSQSRLEIQ GQAPFKQSGV YEAQIAIVGS RPSDAQIKSK QFTSLWRGNF HLRVKDGVFS
ETIGSPENPI PSSVLELETI WIVVTDLFSS LHSVFDVPLS KPKSSPKPPE SKPSETKSNL
ETPKQTRSTK STQSTPGVRG SPGEKGAPGL QGPTGDKGPQ GPPGPTGPPG DKGPDGPQGP
PGDKGPTGDK GPAGDKGIAG DKGITGDKGI TGDKGDKGDK GIPGPVGDKG DKGATGPIGE
KGPTGLKGPI GEKGEKGPTG PPGDKGLSGL KGPPGEKGEK GPTGPPGDKG LTGPVGTPGE
KGPTGQAGVQ GEKGIQGGPG PIGEKGPAGP VGDKGPIGPA GPLGDKGLSG PTGVPGDKGP
IGPPGPIGEK GPKGTEGPIG EKGPQGPQGP AGAKGLTGVP GPQGEKGEKG PTGPPGEKGL
TGPAGPPGEI GTVGPQGSQG ERGPTGPSGE KGPQGPQGIQ GPQGERGPTG PIGSIGEAGP
RGEQGPLGPA GPRGPPGPPG EKGPSGGMSS EQKALFKELL EILTEKNIIS TEEQIKLMSY
LY
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